Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RMST_4.1-201ENST00000616886 107 ntBASIC2.6□□□□□ -1.99
RAD9AQ99638 AL031601.2-202ENST00000622650 282 ntBASIC2.6□□□□□ -1.99
RAD9AQ99638 MIR1291-201ENST00000627649 87 ntBASIC2.6□□□□□ -1.99
RAD9AQ99638 AC016717.2-201ENST00000609089 5141 ntBASIC2.6□□□□□ -1.99
RAD9AQ99638 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RAD9AQ99638 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.59□□□□□ -1.99
RAD9AQ99638 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RAD9AQ99638 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RAD9AQ99638 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 RNY3P3-201ENST00000363816 102 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 RNU6-1303P-201ENST00000364841 107 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 RNU4-20P-201ENST00000365601 151 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 Y_RNA.399-201ENST00000383955 105 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 RNU6-19P-201ENST00000384718 107 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 Y_RNA.573-201ENST00000384763 105 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 U3.37-201ENST00000408528 213 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.59□□□□□ -1.99
RAD9AQ99638 RNU2-3P-201ENST00000410144 191 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 CYCSP33-201ENST00000414485 327 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 AC016831.2-201ENST00000417179 352 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 PGBD4P6-201ENST00000421501 610 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.59□□□□□ -1.99
RAD9AQ99638 PTGES3P4-201ENST00000426243 356 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.59□□□□□ -1.99
RAD9AQ99638 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.59□□□□□ -1.99
RAD9AQ99638 AL121601.2-201ENST00000438019 707 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.59□□□□□ -1.99
RAD9AQ99638 AP000705.1-201ENST00000454567 350 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 snoU109.2-201ENST00000459316 135 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 MTCO3P38-201ENST00000468910 766 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 AC090096.1-201ENST00000489168 390 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.59□□□□□ -1.99
RAD9AQ99638 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.59□□□□□ -1.99
RAD9AQ99638 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.59□□□□□ -1.99
RAD9AQ99638 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.59□□□□□ -1.99
RAD9AQ99638 MTCO3P23-201ENST00000561363 289 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 MIR3616-201ENST00000584070 92 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 U2.17-201ENST00000611454 95 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 AC026585.1-201ENST00000619582 524 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 MIR6873-201ENST00000622788 63 ntBASIC2.59□□□□□ -1.99
RAD9AQ99638 MTND5P6-201ENST00000422338 1798 ntBASIC2.59□□□□□ -2
RAD9AQ99638 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.58□□□□□ -2
RAD9AQ99638 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.58□□□□□ -2
RAD9AQ99638 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.58□□□□□ -2
RAD9AQ99638 OR4G1P-203ENST00000641984 1631 ntBASIC2.58□□□□□ -2
RAD9AQ99638 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RAD9AQ99638 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.58□□□□□ -2
RAD9AQ99638 RNU6-451P-201ENST00000362921 107 ntBASIC2.58□□□□□ -2
RAD9AQ99638 Y_RNA.89-201ENST00000363031 102 ntBASIC2.58□□□□□ -2
RAD9AQ99638 RNA5SP99-201ENST00000364020 114 ntBASIC2.58□□□□□ -2
RAD9AQ99638 RNA5SP210-201ENST00000391034 120 ntBASIC2.58□□□□□ -2
RAD9AQ99638 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.58□□□□□ -2
RAD9AQ99638 AL096701.2-201ENST00000416920 238 ntBASIC2.58□□□□□ -2
RAD9AQ99638 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.58□□□□□ -2
RAD9AQ99638 MRPL50P4-201ENST00000446432 475 ntBASIC2.58□□□□□ -2
RAD9AQ99638 RNU7-26P-201ENST00000458980 63 ntBASIC2.58□□□□□ -2
RAD9AQ99638 RNU7-167P-201ENST00000459160 62 ntBASIC2.58□□□□□ -2
RAD9AQ99638 RPL38P4-201ENST00000502376 214 ntBASIC2.58□□□□□ -2
RAD9AQ99638 GZMAP1-201ENST00000503054 631 ntBASIC2.58□□□□□ -2
RAD9AQ99638 AC091885.1-201ENST00000506658 268 ntBASIC2.58□□□□□ -2
RAD9AQ99638 AC079140.5-201ENST00000507882 310 ntBASIC2.58□□□□□ -2
RAD9AQ99638 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.58□□□□□ -2
RAD9AQ99638 RNU5F-8P-201ENST00000515941 111 ntBASIC2.58□□□□□ -2
RAD9AQ99638 RNU6-1038P-201ENST00000516516 104 ntBASIC2.58□□□□□ -2
RAD9AQ99638 CKS1BP7-201ENST00000522230 235 ntBASIC2.58□□□□□ -2
RAD9AQ99638 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.58□□□□□ -2
RAD9AQ99638 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.58□□□□□ -2
RAD9AQ99638 SNRPGP18-201ENST00000553000 214 ntBASIC2.58□□□□□ -2
RAD9AQ99638 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.58□□□□□ -2
RAD9AQ99638 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RAD9AQ99638 MIR3941-201ENST00000582572 103 ntBASIC2.58□□□□□ -2
RAD9AQ99638 MIR5092-201ENST00000583139 88 ntBASIC2.58□□□□□ -2
RAD9AQ99638 AC010525.2-201ENST00000590920 195 ntBASIC2.58□□□□□ -2
RAD9AQ99638 AL356280.1-201ENST00000603614 379 ntBASIC2.58□□□□□ -2
RAD9AQ99638 AC107304.1-201ENST00000604229 296 ntBASIC2.58□□□□□ -2
RAD9AQ99638 AP000787.2-201ENST00000604432 568 ntBASIC2.58□□□□□ -2
RAD9AQ99638 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.58□□□□□ -2
RAD9AQ99638 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RAD9AQ99638 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.58□□□□□ -2
RAD9AQ99638 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.58□□□□□ -2
RAD9AQ99638 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
RAD9AQ99638 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.58□□□□□ -2
RAD9AQ99638 AC004520.1-201ENST00000608362 1413 ntBASIC2.58□□□□□ -2
RAD9AQ99638 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.58□□□□□ -2
RAD9AQ99638 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
RAD9AQ99638 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.57□□□□□ -2
RAD9AQ99638 Y_RNA.256-201ENST00000364594 104 ntBASIC2.57□□□□□ -2
RAD9AQ99638 RNU6-534P-201ENST00000364877 106 ntBASIC2.57□□□□□ -2
RAD9AQ99638 Y_RNA.295-201ENST00000364918 102 ntBASIC2.57□□□□□ -2
RAD9AQ99638 RNU6-72P-201ENST00000384285 79 ntBASIC2.57□□□□□ -2
RAD9AQ99638 RNU6-748P-201ENST00000384648 107 ntBASIC2.57□□□□□ -2
RAD9AQ99638 RNU6-1072P-201ENST00000384703 107 ntBASIC2.57□□□□□ -2
RAD9AQ99638 RNU6-443P-201ENST00000384780 107 ntBASIC2.57□□□□□ -2
RAD9AQ99638 RAP1BP3-201ENST00000407180 549 ntBASIC2.57□□□□□ -2
RAD9AQ99638 OR9R1P-201ENST00000412200 877 ntBASIC2.57□□□□□ -2
RAD9AQ99638 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.57□□□□□ -2
RAD9AQ99638 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.57□□□□□ -2
RAD9AQ99638 AL441985.1-201ENST00000457727 251 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms