Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDX2Q99626 TEX21P-201ENST00000447107 1476 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 HSPE1P11-201ENST00000339579 310 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 RNU1-22P-201ENST00000363334 158 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 RNU6-288P-201ENST00000363690 104 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 RNU6-501P-201ENST00000364072 100 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 SNORA4.3-201ENST00000365564 137 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CDX2Q99626 RNU6-946P-201ENST00000383878 107 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 Y_RNA.393-201ENST00000383936 102 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 RNU6-19P-201ENST00000384718 107 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 Y_RNA.608-201ENST00000410647 95 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AC092809.3-201ENST00000415453 231 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AL031779.1-201ENST00000415663 330 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AC006366.1-201ENST00000422002 759 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 CYCSP46-201ENST00000423569 204 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AL591212.2-201ENST00000433923 257 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AL353706.1-201ENST00000436728 494 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AL512286.1-201ENST00000439244 400 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX2Q99626 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.7□□□□□ -2.14
CDX2Q99626 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.7□□□□□ -2.14
CDX2Q99626 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.7□□□□□ -2.14
CDX2Q99626 TPT1P7-201ENST00000458300 517 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.7□□□□□ -2.14
CDX2Q99626 AC055731.1-201ENST00000474387 401 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX2Q99626 AC112204.1-201ENST00000502591 103 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.7□□□□□ -2.14
CDX2Q99626 AC091965.2-201ENST00000512324 613 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 RNU6-572P-201ENST00000516724 80 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 RNU1-40P-201ENST00000516816 164 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 RNU6-678P-201ENST00000516832 109 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 RNU1-97P-201ENST00000516872 164 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 SNORA31.19-201ENST00000517079 126 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.7□□□□□ -2.14
CDX2Q99626 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX2Q99626 AL157871.3-201ENST00000557231 293 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 PCMTD1P2-201ENST00000565017 355 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX2Q99626 MIR3167-201ENST00000579623 85 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AC105129.3-201ENST00000605455 485 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AC069294.1-201ENST00000608397 350 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 MIR6078-201ENST00000611069 100 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CDX2Q99626 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.7□□□□□ -2.14
CDX2Q99626 AC009233.1-201ENST00000616477 371 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CDX2Q99626 AC091932.3-201ENST00000624223 323 ntBASIC1.7□□□□□ -2.14
CDX2Q99626 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CDX2Q99626 Y_RNA.41-201ENST00000362646 102 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 RNU6-486P-201ENST00000363116 107 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 RNA5SP138-201ENST00000365098 114 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDX2Q99626 RNU6-533P-201ENST00000384144 107 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 SNORD116-4-201ENST00000384733 96 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 DEFB108C-201ENST00000400154 252 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.69□□□□□ -2.14
CDX2Q99626 MTCO1P21-201ENST00000416634 589 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.69□□□□□ -2.14
CDX2Q99626 USP9YP14-201ENST00000430663 563 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.69□□□□□ -2.14
CDX2Q99626 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.69□□□□□ -2.14
CDX2Q99626 FABP5P14-201ENST00000437273 393 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.69□□□□□ -2.14
CDX2Q99626 RPS15AP9-201ENST00000439856 381 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 KATNBL1P3-201ENST00000443475 909 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 USP9YP29-201ENST00000445112 563 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC003071.1-201ENST00000451219 789 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.69□□□□□ -2.14
CDX2Q99626 AC117503.1-201ENST00000472241 394 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 RN7SL274P-201ENST00000492268 272 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC023194.1-201ENST00000493084 308 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.69□□□□□ -2.14
CDX2Q99626 Y_RNA.655-201ENST00000515919 96 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 RNA5SP337-201ENST00000517007 109 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 ACA59.2-201ENST00000517061 156 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 OR5AQ1P-201ENST00000527596 927 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 OR5B19P-201ENST00000531766 928 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC079598.5-201ENST00000547460 117 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.69□□□□□ -2.14
CDX2Q99626 AC006362.1-201ENST00000567392 174 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AGGF1P4-201ENST00000568249 801 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.69□□□□□ -2.14
CDX2Q99626 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.69□□□□□ -2.14
CDX2Q99626 MIR4448-201ENST00000584360 86 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 MIR4765-201ENST00000585007 77 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 FAM106DP-201ENST00000586416 501 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC007229.1-201ENST00000590455 412 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 MTCYBP22-201ENST00000603788 447 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC121334.2-201ENST00000605387 271 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 RN7SKP299-201ENST00000606679 301 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AP002360.4-201ENST00000606980 481 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC098614.4-201ENST00000607601 462 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.69□□□□□ -2.14
CDX2Q99626 AC130324.3-201ENST00000614165 542 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 AC099842.1-201ENST00000619919 596 ntBASIC1.69□□□□□ -2.14
CDX2Q99626 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.69□□□□□ -2.14
CDX2Q99626 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms