Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ZNF519P1-201ENST00000449011 1626 ntBASIC2.46□□□□□ -2.02
CDCA3Q99618 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CDCA3Q99618 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDCA3Q99618 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.45□□□□□ -2.02
CDCA3Q99618 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CDCA3Q99618 RNY4P14-201ENST00000363656 96 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 Y_RNA.505-201ENST00000384489 102 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 SNORD115-47-201ENST00000391226 86 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 CIR1P3-201ENST00000405137 479 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 RNU6-908P-201ENST00000410160 94 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 FCF1P9-201ENST00000412546 282 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.45□□□□□ -2.02
CDCA3Q99618 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.45□□□□□ -2.02
CDCA3Q99618 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.45□□□□□ -2.02
CDCA3Q99618 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.45□□□□□ -2.02
CDCA3Q99618 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.45□□□□□ -2.02
CDCA3Q99618 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.45□□□□□ -2.02
CDCA3Q99618 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.45□□□□□ -2.02
CDCA3Q99618 RNU6-718P-201ENST00000516166 105 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.45□□□□□ -2.02
CDCA3Q99618 AC136619.2-201ENST00000563361 631 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 AC105137.2-201ENST00000569073 466 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.45□□□□□ -2.02
CDCA3Q99618 MIR4446-201ENST00000578505 67 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.45□□□□□ -2.02
CDCA3Q99618 U2.17-201ENST00000611454 95 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 AC090517.2-201ENST00000614966 680 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 AC026585.1-201ENST00000619582 524 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDCA3Q99618 AC069528.2-201ENST00000624849 1991 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 Z82195.2-201ENST00000612348 18351 ntBASIC2.45□□□□□ -2.02
CDCA3Q99618 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDCA3Q99618 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
CDCA3Q99618 SNORA25.6-201ENST00000364121 118 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 RNU4-20P-201ENST00000365601 151 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 Y_RNA.399-201ENST00000383955 105 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 Y_RNA.450-201ENST00000384198 113 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 MIR147B-201ENST00000390185 80 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.44□□□□□ -2.02
CDCA3Q99618 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.44□□□□□ -2.02
CDCA3Q99618 MTND1P4-201ENST00000435196 415 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 AC004383.1-201ENST00000438135 289 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 CALM1P1-201ENST00000442082 433 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 AC073901.1-201ENST00000462471 408 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 AL121769.1-201ENST00000469473 401 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.44□□□□□ -2.02
CDCA3Q99618 AC092989.1-201ENST00000481235 277 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 RPL23AP70-201ENST00000483361 460 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 MRPL42P6-201ENST00000486397 371 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 MTAPP1-201ENST00000489154 819 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 TBCAP3-201ENST00000512475 312 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 BTF3P12-201ENST00000519620 469 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 AC109635.3-201ENST00000529536 185 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 ELOCP31-201ENST00000540463 467 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 MIR5194-201ENST00000582634 120 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 AC002044.1-201ENST00000606707 158 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 Z82243.1-201ENST00000609432 473 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 FER-210ENST00000628534 558 ntTSL 5 BASIC2.44□□□□□ -2.02
CDCA3Q99618 MIR219B-201ENST00000637023 88 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDCA3Q99618 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
CDCA3Q99618 AC026241.1-201ENST00000517873 2142 ntBASIC2.44□□□□□ -2.02
CDCA3Q99618 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
CDCA3Q99618 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDCA3Q99618 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDCA3Q99618 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.43□□□□□ -2.02
CDCA3Q99618 RNU6-942P-201ENST00000363002 107 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 Y_RNA.480-201ENST00000384364 102 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 RNA5SP219-201ENST00000390940 113 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 AL133475.1-201ENST00000404414 305 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 AL162578.1-201ENST00000406202 378 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 RAP1BP3-201ENST00000407180 549 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 USP9YP18-201ENST00000425912 695 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 UBE2V1P8-201ENST00000437166 265 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 RNU7-167P-201ENST00000459160 62 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 DYNLL1P5-201ENST00000467158 270 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.43□□□□□ -2.02
CDCA3Q99618 AC011352.1-201ENST00000512300 793 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 RNA5SP458-201ENST00000516188 119 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 SNORA31.6-201ENST00000516241 130 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 Y_RNA.676-201ENST00000516393 96 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 SNORD60.2-201ENST00000516883 86 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 AP003033.1-201ENST00000527244 415 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 AL118558.2-201ENST00000556294 238 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 MTCO3P23-201ENST00000561363 289 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDCA3Q99618 AC010525.2-201ENST00000590920 195 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 DISC2.1-201ENST00000612827 205 ntBASIC2.43□□□□□ -2.02
CDCA3Q99618 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDCA3Q99618 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
CDCA3Q99618 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDCA3Q99618 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDCA3Q99618 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CDCA3Q99618 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDCA3Q99618 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-37P-201ENST00000362692 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNA5SP99-201ENST00000364020 114 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-11P-201ENST00000364234 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 SNORA68.1-201ENST00000364537 132 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms