Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 SNORD114-19-201ENST00000363072 75 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 RNU6-288P-201ENST00000363690 104 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 SNORA22-201ENST00000383907 134 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 SNORA22C-201ENST00000384614 134 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 AC119751.3-201ENST00000399720 670 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.11□□□□□ -2.23
SCAF11Q99590 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.11□□□□□ -2.23
SCAF11Q99590 AC006512.1-201ENST00000468816 291 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 AC079395.1-201ENST00000510981 262 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
SCAF11Q99590 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.11□□□□□ -2.23
SCAF11Q99590 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.11□□□□□ -2.23
SCAF11Q99590 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.11□□□□□ -2.23
SCAF11Q99590 RPL30P11-203ENST00000598995 310 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 AL078605.1-201ENST00000603529 500 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 AC009229.3-201ENST00000608056 282 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 AL359314.1-201ENST00000616913 261 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 Z99571.1-201ENST00000636677 394 ntBASIC1.11□□□□□ -2.23
SCAF11Q99590 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.11□□□□□ -2.23
SCAF11Q99590 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SCAF11Q99590 RNU6-621P-201ENST00000364752 109 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 Y_RNA.280-201ENST00000364765 112 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 RNU6-16P-201ENST00000384385 107 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 AC069282.1-201ENST00000411911 526 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SCAF11Q99590 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.1□□□□□ -2.23
SCAF11Q99590 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.1□□□□□ -2.23
SCAF11Q99590 AC104629.1-201ENST00000494226 508 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.1□□□□□ -2.23
SCAF11Q99590 RNU6-586P-201ENST00000517265 104 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 AC009902.1-201ENST00000519351 183 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.1□□□□□ -2.23
SCAF11Q99590 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.1□□□□□ -2.23
SCAF11Q99590 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.1□□□□□ -2.23
SCAF11Q99590 AC018638.7-201ENST00000605836 1114 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 AL158211.2-201ENST00000607282 395 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 AC131235.4-201ENST00000609288 620 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 AC245297.2-201ENST00000610119 565 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SCAF11Q99590 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
SCAF11Q99590 CBX3P1-201ENST00000325243 554 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 RPL30P13-201ENST00000418873 348 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 AC083875.1-201ENST00000419509 405 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.09□□□□□ -2.24
SCAF11Q99590 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.09□□□□□ -2.24
SCAF11Q99590 AC007327.1-201ENST00000447461 264 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.09□□□□□ -2.24
SCAF11Q99590 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.09□□□□□ -2.24
SCAF11Q99590 AC008834.1-201ENST00000511612 175 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 AC109445.1-201ENST00000512356 383 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 AC112198.4-201ENST00000515450 351 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 RNU6-351P-201ENST00000516097 100 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 DEFB108A-201ENST00000530110 222 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.09□□□□□ -2.24
SCAF11Q99590 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.09□□□□□ -2.24
SCAF11Q99590 AL356432.3-201ENST00000568952 465 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 MIR4713-201ENST00000582691 75 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 AC005786.1-201ENST00000588553 154 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 AC092192.1-201ENST00000633154 1018 ntBASIC1.09□□□□□ -2.24
SCAF11Q99590 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SCAF11Q99590 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SCAF11Q99590 ZNF29P-201ENST00000225587 168 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 SNORD115-3-201ENST00000363100 82 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
SCAF11Q99590 Y_RNA.412-201ENST00000384001 104 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 RNU6-413P-201ENST00000384115 107 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 MIR518D-201ENST00000385014 87 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 RNU11-3P-201ENST00000391111 133 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 FTH1P15-201ENST00000406984 280 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 RN7SKP266-201ENST00000410232 287 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 AC138623.1-201ENST00000418060 216 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
SCAF11Q99590 RNA5SP57-201ENST00000459463 123 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 RNU6-667P-201ENST00000517186 102 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.08□□□□□ -2.24
SCAF11Q99590 CYCSP27-201ENST00000527643 293 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 AP003168.1-201ENST00000530091 307 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.08□□□□□ -2.24
SCAF11Q99590 AC092125.1-201ENST00000562568 1995 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.08□□□□□ -2.24
SCAF11Q99590 RNU6-462P-201ENST00000362659 105 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 Y_RNA.60-201ENST00000362831 98 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 SNORD116-12-201ENST00000384468 92 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 MIR29C-201ENST00000385231 88 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 MIR301A-201ENST00000385261 86 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 MIR1283-2-201ENST00000408621 87 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.07□□□□□ -2.24
SCAF11Q99590 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.07□□□□□ -2.24
SCAF11Q99590 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.07□□□□□ -2.24
SCAF11Q99590 FCF1P6-201ENST00000456841 595 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 RNU6-953P-201ENST00000459154 107 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.07□□□□□ -2.24
SCAF11Q99590 MTCYBP43-201ENST00000513621 740 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 MTND1P36-201ENST00000522384 936 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 MTND4LP25-201ENST00000570218 163 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 AP001981.2-201ENST00000603241 418 ntBASIC1.07□□□□□ -2.24
SCAF11Q99590 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.07□□□□□ -2.24
SCAF11Q99590 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms