Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 SNORA31.3-201ENST00000516029 96 ntBASIC0.77□□□□□ -2.29
ALPK3Q96L96 DEFB108A-201ENST00000530110 222 ntBASIC0.77□□□□□ -2.29
ALPK3Q96L96 OR5B19P-201ENST00000531766 928 ntBASIC0.77□□□□□ -2.29
ALPK3Q96L96 LRRC6P1-201ENST00000532188 885 ntBASIC0.77□□□□□ -2.29
ALPK3Q96L96 RAB11AP2-201ENST00000545905 639 ntBASIC0.77□□□□□ -2.29
ALPK3Q96L96 AL133153.1-201ENST00000557756 303 ntBASIC0.77□□□□□ -2.29
ALPK3Q96L96 TUG1_2.1-201ENST00000614234 87 ntBASIC0.77□□□□□ -2.29
ALPK3Q96L96 AL132822.1-201ENST00000617063 513 ntBASIC0.77□□□□□ -2.29
ALPK3Q96L96 U6.99-201ENST00000637524 83 ntBASIC0.77□□□□□ -2.29
ALPK3Q96L96 SNORD115-3-201ENST00000363100 82 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 snoZ40.1-201ENST00000364540 72 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 RNU6-468P-201ENST00000384003 109 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 RNU6-611P-201ENST00000384276 104 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 RPL23AP32-201ENST00000395315 459 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 RNU2-23P-201ENST00000410545 195 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 USP9YP21-201ENST00000420603 432 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 RPL9P9-202ENST00000466501 579 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 RPL30P7-201ENST00000479312 323 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 AC114981.1-201ENST00000503897 678 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 RN7SKP256-201ENST00000517201 314 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 RNU6-902P-201ENST00000517212 91 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 AC174048.1-201ENST00000603389 144 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 NDUFA8P1-201ENST00000605525 367 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 AC124016.2-201ENST00000610058 665 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 MIR6134-201ENST00000617606 109 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 MIR6086-201ENST00000638065 55 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 MTND4P12-201ENST00000498999 1377 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 AC092125.1-201ENST00000562568 1995 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 RNA5SP347-201ENST00000362445 119 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 RNU6-944P-201ENST00000364023 107 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 USP9YP33-201ENST00000412220 421 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 USP9YP35-201ENST00000435696 412 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 MTCYBP42-201ENST00000444653 1130 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 SNORA31.17-201ENST00000516953 127 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 AC009902.1-201ENST00000519351 183 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 AL157871.3-201ENST00000557231 293 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 CLIC4P2-201ENST00000601934 717 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 uc_338.15-201ENST00000615470 191 ntBASIC0.76□□□□□ -2.29
ALPK3Q96L96 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.76□□□□□ -2.29
ALPK3Q96L96 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.75□□□□□ -2.29
ALPK3Q96L96 SNORD114-6-201ENST00000364393 72 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
ALPK3Q96L96 MIR1267-201ENST00000408723 78 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 AC068533.2-201ENST00000411872 306 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 TOMM22P2-201ENST00000430735 237 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.75□□□□□ -2.29
ALPK3Q96L96 USP9YP17-201ENST00000444617 696 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 RPL30P6-201ENST00000475925 342 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.75□□□□□ -2.29
ALPK3Q96L96 RNU6-496P-201ENST00000516145 99 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 RNU6-965P-201ENST00000516721 96 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 AC021451.1-201ENST00000523498 1129 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 AC004812.1-201ENST00000540773 146 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 AL136520.1-202ENST00000555494 763 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 AC012065.4-201ENST00000602445 679 ntBASIC0.75□□□□□ -2.29
ALPK3Q96L96 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.75□□□□□ -2.29
ALPK3Q96L96 RNU1-23P-201ENST00000363361 144 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 RAC1P6-201ENST00000423911 575 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC108729.1-201ENST00000487812 947 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 RNA5SP404-201ENST00000517118 132 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 AP003049.1-201ENST00000529418 457 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 AL355472.4-201ENST00000610233 626 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC012676.2-201ENST00000619258 186 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC008993.2-201ENST00000631744 806 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
ALPK3Q96L96 Y_RNA.234-201ENST00000364409 97 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 RNU6-744P-201ENST00000365557 107 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 RNU6-1316P-201ENST00000384242 108 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 RNA5SP501-201ENST00000410990 112 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC098934.3-201ENST00000430450 190 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 MTND4P25-201ENST00000441039 533 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 CR769776.1-201ENST00000441254 787 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 AL132657.2-201ENST00000564417 358 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms