Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AL022161.1-201ENST00000604390 213 ntBASIC1.73□□□□□ -2.13
PKNOX2Q96KN3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.73□□□□□ -2.13
PKNOX2Q96KN3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.73□□□□□ -2.13
PKNOX2Q96KN3 AC064859.1-201ENST00000624741 174 ntBASIC1.73□□□□□ -2.13
PKNOX2Q96KN3 AL157786.1-207ENST00000627771 695 ntBASIC1.73□□□□□ -2.13
PKNOX2Q96KN3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.73□□□□□ -2.13
PKNOX2Q96KN3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.73□□□□□ -2.13
PKNOX2Q96KN3 OR4G2P-201ENST00000328113 903 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 RNU6-384P-201ENST00000364900 104 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 RNU6-61P-201ENST00000365528 109 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 RNU6-641P-201ENST00000384006 107 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 SNORA70.7-201ENST00000384159 133 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 SNORA59A-201ENST00000459326 152 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 RPL30P6-201ENST00000475925 342 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 ANXA2P1-201ENST00000505539 926 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 Y_RNA.687-201ENST00000516558 91 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 CYCSP27-201ENST00000527643 293 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 AC090616.2-202ENST00000584248 222 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 AC008521.1-201ENST00000587471 187 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 AC091304.9-201ENST00000612091 226 ntBASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
PKNOX2Q96KN3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 RNU1-58P-201ENST00000362413 163 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 RNU6-529P-201ENST00000363383 104 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 RNY1P12-201ENST00000364251 105 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 RNU6-371P-201ENST00000364283 108 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 SNORD14D-201ENST00000384390 87 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 SNORD116-20-201ENST00000384529 92 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 Y_RNA.598-201ENST00000410480 95 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 RN7SKP192-201ENST00000411291 327 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 DPH3P2-201ENST00000422618 250 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 VN1R108P-201ENST00000431580 830 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 MTCO1P44-201ENST00000441935 243 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 AL360271.2-201ENST00000447710 161 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 AC006026.2-201ENST00000457376 180 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 RBBP4P6-201ENST00000508098 202 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 FABP5P5-201ENST00000515537 406 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 RAB11AP2-201ENST00000545905 639 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 AC009977.1-201ENST00000586015 570 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 AL353778.1-201ENST00000603149 408 ntBASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PKNOX2Q96KN3 SNORD115-3-201ENST00000363100 82 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 SNORA3.2-201ENST00000408221 125 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 RNA5SP390-201ENST00000410191 113 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 RNU2-23P-201ENST00000410545 195 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 MTCYBP5-201ENST00000423752 1135 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 AL365400.1-201ENST00000431854 640 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 RAP1BP2-201ENST00000478270 544 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 SNORA43.2-201ENST00000516652 128 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 RNU2-46P-201ENST00000517038 113 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 AC005668.1-201ENST00000571142 476 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 WISP1-OT1-201ENST00000602893 642 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 AL050343.2-201ENST00000607338 280 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 AL121890.5-201ENST00000620848 304 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 AC131159.1-201ENST00000621854 213 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 MTND4P4-201ENST00000439033 1366 ntBASIC1.7□□□□□ -2.14
PKNOX2Q96KN3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 RNU6-655P-201ENST00000362858 107 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 SNORA20.2-201ENST00000383922 131 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 RNU6-387P-201ENST00000411331 105 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 RNA5SP111-201ENST00000411386 101 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AL513185.2-201ENST00000425543 193 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AL139415.2-201ENST00000431968 163 ntBASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.69□□□□□ -2.14
PKNOX2Q96KN3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms