Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC023141.4-201ENST00000412031 328 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 AC005534.2-201ENST00000431047 433 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 CST9LP2-201ENST00000437612 320 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 AL513043.1-201ENST00000439124 535 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS50Q96JG6 AC115115.1-201ENST00000449927 248 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 AC013470.1-201ENST00000453438 462 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 ELOCP24-201ENST00000456370 334 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 BX510359.1-201ENST00000456973 237 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS50Q96JG6 RPL9P9-202ENST00000466501 579 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 RN7SL499P-201ENST00000481141 276 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS50Q96JG6 AK3P2-201ENST00000507976 429 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS50Q96JG6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS50Q96JG6 SNORA43.2-201ENST00000516652 128 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 RN7SKP57-201ENST00000517248 293 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS50Q96JG6 CPDP1-201ENST00000579660 283 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 AL080274.1-201ENST00000605565 220 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS50Q96JG6 AC091953.5-201ENST00000622919 233 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 AC097372.5-201ENST00000623665 376 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 AC092608.2-201ENST00000624427 218 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 MIR3651-201ENST00000630427 90 ntBASIC3.14□□□□□ -1.91
VPS50Q96JG6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VPS50Q96JG6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS50Q96JG6 RNA5SP197-201ENST00000363357 119 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 Y_RNA.187-201ENST00000363918 113 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 RNU6-336P-201ENST00000364891 107 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 RNU1-100P-201ENST00000365255 165 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 RNU6-890P-201ENST00000384121 107 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 RNU6-198P-201ENST00000384258 104 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 RNU6-293P-201ENST00000411259 106 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 AL139281.1-201ENST00000422120 335 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS50Q96JG6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS50Q96JG6 AL133396.1-201ENST00000432048 687 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 HMGN2P10-201ENST00000448085 265 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 MIR2053-201ENST00000459295 91 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 RNU6-1037P-201ENST00000459571 107 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 RNU6-377P-201ENST00000515965 102 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 RNU6-1170P-201ENST00000515974 106 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS50Q96JG6 AC021739.1-201ENST00000559631 174 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 AC020661.2-201ENST00000560114 134 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 AP000787.2-201ENST00000604432 568 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 PISRT1.1-201ENST00000616930 107 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 SCARNA4-202ENST00000625402 129 ntBASIC3.13□□□□□ -1.91
VPS50Q96JG6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS50Q96JG6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS50Q96JG6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS50Q96JG6 AC009487.2-201ENST00000420969 6821 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 AC110491.1-201ENST00000562191 2010 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS50Q96JG6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS50Q96JG6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS50Q96JG6 Y_RNA.2-201ENST00000362330 96 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 Y_RNA.146-201ENST00000363549 102 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 Y_RNA.216-201ENST00000364205 93 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 FTH1P15-201ENST00000406984 280 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 MIR1302-11-201ENST00000408051 138 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 MIR1302-9-201ENST00000408365 138 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 MIR1302-10-201ENST00000408734 138 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS50Q96JG6 Y_RNA.639-201ENST00000458981 102 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 AC097473.1-201ENST00000508142 408 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 AP003072.1-201ENST00000531740 145 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 AC005476.1-201ENST00000554427 397 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 AL121821.2-201ENST00000556081 394 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS50Q96JG6 MIR1302-2-201ENST00000607096 138 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 AC005046.1-201ENST00000608515 625 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 AL591516.1-201ENST00000611326 274 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 CDC27P3-201ENST00000635418 1910 ntBASIC3.12□□□□□ -1.91
VPS50Q96JG6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VPS50Q96JG6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VPS50Q96JG6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VPS50Q96JG6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VPS50Q96JG6 Y_RNA.31-201ENST00000362574 102 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 Y_RNA.48-201ENST00000362710 103 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS50Q96JG6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS50Q96JG6 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 AC008571.1-201ENST00000467232 300 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 AC128713.1-201ENST00000471495 306 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 FO393415.2-201ENST00000480085 343 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 SCARNA16.2-201ENST00000516520 172 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 AC109479.2-201ENST00000517842 174 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 AP004607.1-201ENST00000524456 203 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 AC006199.1-201ENST00000548728 219 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 AC109446.1-201ENST00000566172 220 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 MIR5004-201ENST00000579078 107 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 AC024153.1-201ENST00000603103 365 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS50Q96JG6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS50Q96JG6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 272.2 ms