Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SNORA25.11-201ENST00000515935 105 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 RNU4-29P-201ENST00000515943 174 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 AP004607.1-201ENST00000524456 203 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 AC118273.2-201ENST00000532092 465 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 AL118558.2-201ENST00000556294 238 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 AC060780.3-201ENST00000589464 80 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 AL138889.2-201ENST00000603883 242 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 RNU6-89P-201ENST00000606519 100 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 MIR7106-201ENST00000612419 65 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 AC104237.2-201ENST00000612456 443 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 AC011890.2-201ENST00000613393 294 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 U4.3-201ENST00000621047 82 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 OR4G1P-203ENST00000641984 1631 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 CASC19-280ENST00000642102 1351 ntBASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.45□□□□□ -2.02
PDLIM5Q96HC4 Y_RNA.167-201ENST00000363735 109 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 SNORA41-201ENST00000384675 132 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AL606923.1-201ENST00000406616 190 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 FTH1P15-201ENST00000406984 280 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 RNA5SP184-201ENST00000411071 108 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 RPL23AP83-201ENST00000434984 473 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AL353572.1-201ENST00000442490 417 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 SCARNA18-201ENST00000459004 134 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AC091885.1-201ENST00000506658 268 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AC008526.1-201ENST00000509149 338 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AC078814.3-201ENST00000553036 491 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 MIR5692A1-201ENST00000580523 69 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 BNIP3P22-201ENST00000593399 556 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AL355297.2-201ENST00000604792 129 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AC006504.8-201ENST00000621046 635 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 Z82195.2-201ENST00000612348 18351 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 AC016717.2-201ENST00000609089 5141 ntBASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.44□□□□□ -2.02
PDLIM5Q96HC4 RNU6-522P-201ENST00000364497 107 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 RNU4-66P-201ENST00000365199 138 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 SNORA16.2-201ENST00000390991 127 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 RNA5SP118-201ENST00000410385 109 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 RNU6-373P-201ENST00000411247 98 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AC016831.2-201ENST00000417179 352 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 ARL5AP4-201ENST00000430731 512 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AL365400.1-201ENST00000431854 640 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AC073901.1-201ENST00000462471 408 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 MED28P2-201ENST00000475771 317 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 RPL21P99-201ENST00000480369 423 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 HMGB1P30-201ENST00000492455 606 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AC022493.1-201ENST00000492984 337 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 RN7SKP24-201ENST00000515888 284 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 RNA5SP356-201ENST00000515972 94 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 SNORA20.3-201ENST00000516880 132 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 MTND4P7-201ENST00000523876 130 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 MTCO3P23-201ENST00000561363 289 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 MIR548S-201ENST00000581352 82 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 RPS15AP11-201ENST00000594193 385 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AL049779.4-201ENST00000604500 156 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AL137847.3-201ENST00000611521 109 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AC245884.12-201ENST00000615364 59 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 uc_338.34-201ENST00000617467 174 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 AC008121.3-201ENST00000618726 433 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 SCARNA4-202ENST00000625402 129 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 MTND4P14-201ENST00000435799 1354 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PDLIM5Q96HC4 Y_RNA.231-201ENST00000364358 102 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 RNU6-715P-201ENST00000365204 103 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 U8.8-201ENST00000365399 135 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 SNORA75B-201ENST00000384053 137 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 RNU6-1179P-201ENST00000384667 107 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 MIR578-201ENST00000384828 96 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 MIR483-201ENST00000385070 76 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 SNORD70.1-201ENST00000391007 85 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 AL133475.1-201ENST00000404414 305 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 Y_RNA.615-201ENST00000410769 117 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 RNU6-1148P-201ENST00000410992 104 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 NUP35P1-201ENST00000422734 947 ntBASIC2.42□□□□□ -2.02
PDLIM5Q96HC4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms