Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AC006199.1-201ENST00000548728 219 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 7SK.7-201ENST00000603504 247 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 AC006157.1-201ENST00000611750 366 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 HMGB1P24-202ENST00000615653 685 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 MIR3529-201ENST00000637713 78 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 ZNF299P-201ENST00000406845 1804 ntBASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.05□□□□□ -1.92
CTHRC1Q96CG8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AC010680.1-201ENST00000590024 3590 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AC073346.2-201ENST00000624724 2058 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 SNORD56.1-201ENST00000362913 68 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 RNU6-1032P-201ENST00000384100 107 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AP000275.1-201ENST00000411943 390 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 MCFD2P1-201ENST00000417812 300 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AC245291.1-201ENST00000419501 328 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 CST9LP2-201ENST00000437612 320 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 HMGN1P18-201ENST00000457642 277 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 RPS29P27-201ENST00000463711 170 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 RNU6-120P-201ENST00000516077 103 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AC009163.5-201ENST00000575421 637 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 MIR5696-201ENST00000578474 85 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AP001836.1-201ENST00000604675 523 ntBASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CTHRC1Q96CG8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 Y_RNA.123-201ENST00000363338 102 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 U3.6-201ENST00000363622 211 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 RNU1-115P-201ENST00000365329 160 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 Y_RNA.364-201ENST00000365532 101 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 SNORA9-201ENST00000384215 133 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 Y_RNA.533-201ENST00000384596 114 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 Y_RNA.577-201ENST00000384794 101 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 RNU6-700P-201ENST00000391043 107 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 SNORA11.1-201ENST00000408133 129 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AL353997.1-201ENST00000432936 108 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 RPS15AP5-201ENST00000436276 388 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AL161651.1-201ENST00000440882 223 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AC092185.1-201ENST00000491371 97 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 RNU5F-8P-201ENST00000515941 111 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 SCARNA20.6-201ENST00000517251 106 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AC104027.1-201ENST00000521887 300 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 MIR2682-201ENST00000580305 110 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AL161756.2-201ENST00000604597 246 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AC019159.1-201ENST00000605094 187 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AL356157.2-201ENST00000605122 111 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AC097372.5-201ENST00000623665 376 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 AC241585.2-209ENST00000638217 143 ntBASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTHRC1Q96CG8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
CTHRC1Q96CG8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AC009541.1-201ENST00000438279 2662 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 Y_RNA.145-201ENST00000363527 102 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 Y_RNA.148-201ENST00000363557 117 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 SNORA63C-201ENST00000364578 129 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 Y_RNA.314-201ENST00000365114 102 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 RNU6-784P-201ENST00000384330 106 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 RNY1P14-201ENST00000384426 108 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 RNA5SP252-201ENST00000391131 119 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 MRPL42P3-201ENST00000401492 326 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AC243964.1-201ENST00000441814 261 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 Z75741.1-201ENST00000446793 314 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AL441985.1-201ENST00000457727 251 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 MED28P2-201ENST00000475771 317 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AC015911.1-201ENST00000495111 156 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AC097462.2-201ENST00000504623 481 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AC110794.1-201ENST00000505816 425 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms