Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNU6-778P-201ENST00000363269 103 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 RNU6-1066P-201ENST00000363573 105 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 RNU2-36P-201ENST00000410361 191 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC010099.3-201ENST00000423896 409 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AL121578.1-201ENST00000428051 892 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 MTCO1P44-201ENST00000441935 243 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC091860.1-201ENST00000505723 432 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC010460.2-201ENST00000509054 677 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 MTCO3P42-201ENST00000509488 518 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 MTCO3P39-201ENST00000514812 518 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 RNU6-528P-201ENST00000516926 100 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 COPS8P3-201ENST00000526024 482 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC090502.2-201ENST00000549267 280 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC009269.6-201ENST00000621778 588 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 RMST_7.1-201ENST00000621935 268 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC104820.1-201ENST00000624183 307 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 ZNF680P1-201ENST00000436625 1469 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 MIR224-201ENST00000384889 81 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 MIR146A-201ENST00000385201 99 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 RNU2-48P-201ENST00000410694 191 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 MTATP6P27-201ENST00000416987 621 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.42□□□□□ -2.34
TTC28Q96AY4 AL358794.1-201ENST00000445689 381 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 MTND5P8-201ENST00000449817 1083 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AL160314.1-201ENST00000490836 438 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 RPL22P13-201ENST00000493291 347 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AC112206.3-201ENST00000514578 389 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 RNA5SP180-201ENST00000516181 101 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 RNU6-714P-201ENST00000516963 103 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 ACA59.2-201ENST00000517061 156 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AC141557.1-201ENST00000540982 400 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 ROCK1P1-201ENST00000573767 549 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AC012213.3-201ENST00000577199 777 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AC091057.3-201ENST00000602684 733 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AC011451.2-201ENST00000604303 598 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 U1.36-201ENST00000620684 176 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 Y_RNA.245-201ENST00000364493 95 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 SNORA25.8-201ENST00000364831 128 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 Y_RNA.511-201ENST00000384514 103 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 MIR518D-201ENST00000385014 87 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 MIR16-1-201ENST00000385271 89 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 SNORD65C-201ENST00000390962 71 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 RNU6-370P-201ENST00000411008 104 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 USP9YP26-201ENST00000421008 661 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AL139421.1-201ENST00000423010 169 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 USP9YP18-201ENST00000425912 695 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 C1DP1-201ENST00000426049 402 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AP003392.2-201ENST00000527269 208 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AP001180.6-201ENST00000584918 159 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.42□□□□□ -2.34
TTC28Q96AY4 AC009032.1-201ENST00000617574 431 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.42□□□□□ -2.34
TTC28Q96AY4 AL512506.2-201ENST00000624472 458 ntBASIC0.42□□□□□ -2.34
TTC28Q96AY4 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.42□□□□□ -2.34
TTC28Q96AY4 FARSBP1-201ENST00000435808 1778 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 SNORD115-48-201ENST00000364764 76 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 Y_RNA.442-201ENST00000384131 102 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 RNU6-1300P-201ENST00000391046 108 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 SNORA40C-201ENST00000391285 128 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 MIR938-201ENST00000401216 83 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 MTND1P21-201ENST00000412991 285 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 TPMTP2-201ENST00000414372 726 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 UBE2FP1-201ENST00000416536 447 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 SFR1P2-201ENST00000421841 730 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 RPL36AP53-201ENST00000432891 316 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 RPS29P8-201ENST00000445109 171 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AL035666.1-201ENST00000446195 348 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 MTCYBP11-201ENST00000447254 1109 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
TTC28Q96AY4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 RPS29P27-201ENST00000463711 170 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC108729.1-201ENST00000487812 947 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC093677.1-201ENST00000514414 678 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC110760.3-202ENST00000515177 371 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC093023.1-201ENST00000547375 507 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 MIR4422-201ENST00000581938 83 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC099654.5-201ENST00000636479 350 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AL079343.1-201ENST00000572358 1771 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 SNORD56.4-201ENST00000363883 71 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 MIR30A-201ENST00000385092 71 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AL591034.2-201ENST00000402839 359 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 RNA5SP501-201ENST00000410990 112 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 MTCO3P5-201ENST00000433620 714 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 OR6C5P-201ENST00000452388 923 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 RPL7P43-201ENST00000478876 753 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms