Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL358232.1-201ENST00000448030 501 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.74□□□□□ -1.81
ERCC4Q92889 AL353752.1-201ENST00000454946 260 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 RNA5SP310-201ENST00000459084 116 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 U8.20-201ENST00000459445 131 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 AC106707.2-201ENST00000484182 374 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.74□□□□□ -1.81
ERCC4Q92889 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.74□□□□□ -1.81
ERCC4Q92889 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.74□□□□□ -1.81
ERCC4Q92889 MIR4782-201ENST00000577987 79 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 VN1R107P-201ENST00000601784 209 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 AC012468.1-201ENST00000604888 430 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 PRR13P7-201ENST00000605538 430 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.74□□□□□ -1.81
ERCC4Q92889 AC009093.8-201ENST00000641769 292 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ERCC4Q92889 ZNF299P-201ENST00000406845 1804 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.74□□□□□ -1.81
ERCC4Q92889 MTND5P7-201ENST00000413558 1798 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.73□□□□□ -1.81
ERCC4Q92889 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.73□□□□□ -1.81
ERCC4Q92889 SNORD50.1-201ENST00000362987 71 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 U3.6-201ENST00000363622 211 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 RNU5E-7P-201ENST00000365290 117 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 RNU6-823P-201ENST00000391042 103 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 U3.37-201ENST00000408528 213 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.73□□□□□ -1.81
ERCC4Q92889 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.73□□□□□ -1.81
ERCC4Q92889 AC098831.1-201ENST00000440661 216 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ERCC4Q92889 AC079354.2-201ENST00000453523 154 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.73□□□□□ -1.81
ERCC4Q92889 AK3P2-201ENST00000507976 429 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 RNA5SP385-201ENST00000515947 110 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 RNU1-103P-201ENST00000516502 125 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 RNU6-612P-201ENST00000516909 102 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.73□□□□□ -1.81
ERCC4Q92889 AC008269.2-201ENST00000561915 1105 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.73□□□□□ -1.81
ERCC4Q92889 AMZ2P1-203ENST00000565833 850 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 AL162713.1-201ENST00000604480 262 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 AC008962.1-201ENST00000605729 304 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 AC068831.7-201ENST00000616954 363 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 AC090617.7-201ENST00000623952 126 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 U6.99-201ENST00000637524 83 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ERCC4Q92889 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ERCC4Q92889 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
ERCC4Q92889 MFSD8-233ENST00000641482 4860 ntBASIC3.73□□□□□ -1.81
ERCC4Q92889 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.73□□□□□ -1.81
ERCC4Q92889 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ERCC4Q92889 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.73□□□□□ -1.81
ERCC4Q92889 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.72□□□□□ -1.81
ERCC4Q92889 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.72□□□□□ -1.81
ERCC4Q92889 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.72□□□□□ -1.81
ERCC4Q92889 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.72□□□□□ -1.81
ERCC4Q92889 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
ERCC4Q92889 SNORA71.3-201ENST00000362582 128 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 RNU6-942P-201ENST00000363002 107 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 RNU4-42P-201ENST00000364738 142 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 RNU6-336P-201ENST00000364891 107 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 RNU1-73P-201ENST00000383971 164 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 RNU6-784P-201ENST00000384330 106 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 MIR888-201ENST00000401186 77 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 RNA5SP44-201ENST00000410446 133 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 RPS29P4-201ENST00000414733 161 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 AC096644.2-201ENST00000429278 159 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ERCC4Q92889 snoU109.2-201ENST00000459316 135 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 AC091153.1-201ENST00000466297 402 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.72□□□□□ -1.81
ERCC4Q92889 AC114801.2-201ENST00000503825 781 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.72□□□□□ -1.81
ERCC4Q92889 RNU6-377P-201ENST00000515965 102 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 SNORA40.14-201ENST00000516543 86 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 AC022616.4-201ENST00000522985 181 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.72□□□□□ -1.81
ERCC4Q92889 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 AC004817.2-201ENST00000561794 651 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.72□□□□□ -1.81
ERCC4Q92889 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.72□□□□□ -1.81
ERCC4Q92889 MIR4506-201ENST00000584693 77 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.72□□□□□ -1.81
ERCC4Q92889 AC024153.1-201ENST00000603103 365 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.72□□□□□ -1.81
ERCC4Q92889 AC009318.2-201ENST00000610917 651 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.72□□□□□ -1.81
ERCC4Q92889 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.72□□□□□ -1.81
ERCC4Q92889 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ERCC4Q92889 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ERCC4Q92889 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ERCC4Q92889 MTND5P9-201ENST00000503854 1755 ntBASIC3.71□□□□□ -1.81
ERCC4Q92889 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.71□□□□□ -1.82
ERCC4Q92889 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ERCC4Q92889 MIR148B-201ENST00000362252 99 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 Y_RNA.47-201ENST00000362697 108 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 Y_RNA.149-201ENST00000363558 117 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 Y_RNA.314-201ENST00000365114 102 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 MIR521-1-201ENST00000384902 87 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms