Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SNORD116-20-201ENST00000384529 92 ntBASIC0.65□□□□□ -2.31
AP3S1Q92572 SNORA11.2-201ENST00000408318 127 ntBASIC0.65□□□□□ -2.31
AP3S1Q92572 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.65□□□□□ -2.31
AP3S1Q92572 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.65□□□□□ -2.31
AP3S1Q92572 AL121890.1-201ENST00000435457 205 ntBASIC0.65□□□□□ -2.31
AP3S1Q92572 AC010095.1-201ENST00000443543 144 ntBASIC0.65□□□□□ -2.31
AP3S1Q92572 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.65□□□□□ -2.31
AP3S1Q92572 AL583843.1-201ENST00000456070 346 ntBASIC0.65□□□□□ -2.31
AP3S1Q92572 AC005741.1-201ENST00000511094 432 ntBASIC0.65□□□□□ -2.31
AP3S1Q92572 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.65□□□□□ -2.31
AP3S1Q92572 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
AP3S1Q92572 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.65□□□□□ -2.31
AP3S1Q92572 RNU6-197P-201ENST00000516680 100 ntBASIC0.65□□□□□ -2.31
AP3S1Q92572 MTCO2P2-201ENST00000591258 225 ntBASIC0.65□□□□□ -2.31
AP3S1Q92572 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.64□□□□□ -2.31
AP3S1Q92572 SNORA4.3-201ENST00000365564 137 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 Y_RNA.408-201ENST00000383987 102 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 RNU6-72P-201ENST00000384285 79 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 RNU6-278P-201ENST00000390945 109 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 AC123900.1-201ENST00000420390 96 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.64□□□□□ -2.31
AP3S1Q92572 MTCYBP42-201ENST00000444653 1130 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.64□□□□□ -2.31
AP3S1Q92572 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
AP3S1Q92572 ZNF886P-201ENST00000450781 723 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 MTND1P3-201ENST00000484956 952 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 TRBVA-201ENST00000498804 316 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
AP3S1Q92572 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.64□□□□□ -2.31
AP3S1Q92572 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.64□□□□□ -2.31
AP3S1Q92572 CBX3P8-201ENST00000532412 525 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 AL512347.1-201ENST00000566420 503 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.64□□□□□ -2.31
AP3S1Q92572 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.64□□□□□ -2.31
AP3S1Q92572 AC107304.1-201ENST00000604229 296 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 AC078880.5-201ENST00000617845 421 ntBASIC0.64□□□□□ -2.31
AP3S1Q92572 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.64□□□□□ -2.31
AP3S1Q92572 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.64□□□□□ -2.31
AP3S1Q92572 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.63□□□□□ -2.31
AP3S1Q92572 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
AP3S1Q92572 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
AP3S1Q92572 AL391987.6-201ENST00000305671 199 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 MIR608-201ENST00000384820 100 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 FCF1P10-201ENST00000407590 479 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 AL359704.1-201ENST00000411586 781 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 AC004965.1-201ENST00000413033 213 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.63□□□□□ -2.31
AP3S1Q92572 AL953862.1-201ENST00000423016 168 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 AC010099.3-201ENST00000423896 409 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 AL365400.1-201ENST00000431854 640 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 AL591806.2-201ENST00000433122 173 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 AL591212.2-201ENST00000433923 257 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 MTCO2P25-201ENST00000447065 681 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 MTND2P33-201ENST00000506452 1031 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 RNU6-914P-201ENST00000516749 109 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 SNORA70.22-201ENST00000517160 124 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 DEFB108A-201ENST00000530110 222 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.63□□□□□ -2.31
AP3S1Q92572 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 RNU6-87P-201ENST00000607561 108 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 AC130324.3-201ENST00000614165 542 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 AC091895.1-201ENST00000624494 256 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.63□□□□□ -2.31
AP3S1Q92572 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.63□□□□□ -2.31
AP3S1Q92572 AC068647.2-201ENST00000637380 353 ntBASIC0.63□□□□□ -2.31
AP3S1Q92572 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
AP3S1Q92572 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.62□□□□□ -2.31
AP3S1Q92572 SNORA63D-201ENST00000364359 132 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 SNORD114-24-201ENST00000365029 72 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 SNORA17.3-201ENST00000391159 129 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 RNU11-5P-201ENST00000391216 129 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.62□□□□□ -2.31
AP3S1Q92572 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 MTCYBP5-201ENST00000423752 1135 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 MTND1P30-201ENST00000441241 901 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 AP000542.1-201ENST00000448473 371 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.62□□□□□ -2.31
AP3S1Q92572 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.62□□□□□ -2.31
AP3S1Q92572 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.62□□□□□ -2.31
AP3S1Q92572 PDCD5P2-201ENST00000507570 312 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 AC091163.3-201ENST00000518269 1144 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.62□□□□□ -2.31
AP3S1Q92572 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.62□□□□□ -2.31
AP3S1Q92572 AC040896.1-201ENST00000613819 479 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 AC099654.8-201ENST00000637757 681 ntBASIC0.62□□□□□ -2.31
AP3S1Q92572 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
AP3S1Q92572 RNU6-1019P-201ENST00000364424 107 ntBASIC0.61□□□□□ -2.31
AP3S1Q92572 RNU6-609P-201ENST00000365459 107 ntBASIC0.61□□□□□ -2.31
AP3S1Q92572 Y_RNA.623-201ENST00000411128 95 ntBASIC0.61□□□□□ -2.31
AP3S1Q92572 MTCO1P17-201ENST00000411522 491 ntBASIC0.61□□□□□ -2.31
AP3S1Q92572 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.61□□□□□ -2.31
AP3S1Q92572 AP1B1P2-201ENST00000416196 106 ntBASIC0.61□□□□□ -2.31
AP3S1Q92572 AC006026.2-201ENST00000457376 180 ntBASIC0.61□□□□□ -2.31
AP3S1Q92572 snoU13.30-201ENST00000458951 104 ntBASIC0.61□□□□□ -2.31
AP3S1Q92572 snoU13.27-201ENST00000459278 104 ntBASIC0.61□□□□□ -2.31
AP3S1Q92572 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.61□□□□□ -2.31
AP3S1Q92572 AC022784.5-201ENST00000522241 437 ntBASIC0.61□□□□□ -2.31
AP3S1Q92572 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms