Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 SNORA25.9-201ENST00000365087 128 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 RNU6-395P-201ENST00000365662 106 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AL160275.3-201ENST00000423876 471 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 RPS3AP44-201ENST00000425466 790 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC133104.1-201ENST00000429100 218 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 MTND1P4-201ENST00000435196 415 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 MTND1P1-201ENST00000445453 368 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AL136380.1-201ENST00000447970 162 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC132479.1-201ENST00000449160 144 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC005840.1-201ENST00000498412 377 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC112206.3-201ENST00000514578 389 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC090572.1-201ENST00000519251 160 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 FAM92A1P1-201ENST00000528023 890 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC110588.1-201ENST00000559699 137 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC174048.1-201ENST00000603389 144 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC124864.2-201ENST00000624736 186 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 MIR7157-201ENST00000635801 60 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC068137.3-201ENST00000639191 341 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC073869.6-201ENST00000640656 341 ntBASIC2.34□□□□□ -2.03
U2AF1L4Q8WU68 AC027514.1-201ENST00000588561 1603 ntBASIC2.34□□□□□ -2.04
U2AF1L4Q8WU68 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 Y_RNA.116-201ENST00000363292 103 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 RNU6-457P-201ENST00000363999 107 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 Y_RNA.296-201ENST00000364930 108 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 RNU6-517P-201ENST00000384362 110 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 RNU6-1179P-201ENST00000384667 107 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 MIR518E-201ENST00000385252 88 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 SNORA48.3-201ENST00000391081 134 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 USP9YP28-201ENST00000435142 589 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 NDUFA5P4-201ENST00000436704 385 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 AC026801.1-201ENST00000497178 464 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 RNA5SP112-201ENST00000515937 99 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 RNU6-506P-201ENST00000516553 94 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 MTND1P5-201ENST00000517906 940 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 AC025165.5-201ENST00000602802 578 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 AL359821.1-201ENST00000605519 182 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 AL158209.2-201ENST00000619266 216 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 MAPK10-266ENST00000641066 6555 ntBASIC2.33□□□□□ -2.04
U2AF1L4Q8WU68 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 Y_RNA.6-201ENST00000362350 114 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 RNU6-486P-201ENST00000363116 107 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 RNU6-1103P-201ENST00000384150 107 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 Y_RNA.554-201ENST00000384672 102 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 MIR578-201ENST00000384828 96 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 CIR1P3-201ENST00000405137 479 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 Y_RNA.623-201ENST00000411128 95 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 UBE2V1P10-201ENST00000414685 269 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 AC097463.2-201ENST00000421074 142 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 PGBD4P6-201ENST00000421501 610 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 MED13P1-201ENST00000428342 171 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 CALM2P2-201ENST00000428512 440 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 MTATP6P16-201ENST00000434543 526 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 AL031659.1-201ENST00000447075 539 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 MRPL42P6-201ENST00000486397 371 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 RPL23AP63-201ENST00000498752 471 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 TPRKBP2-201ENST00000565969 475 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 MYL12BP1-201ENST00000569826 507 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 AL391646.1-201ENST00000603860 190 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 AC007684.1-201ENST00000609671 477 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 Y_RNA.783-201ENST00000613546 102 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 MIR6863-201ENST00000636112 90 ntBASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
U2AF1L4Q8WU68 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
U2AF1L4Q8WU68 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
U2AF1L4Q8WU68 AC103710.2-202ENST00000641454 2853 ntBASIC2.31□□□□□ -2.04
U2AF1L4Q8WU68 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.31□□□□□ -2.04
U2AF1L4Q8WU68 Y_RNA.122-201ENST00000363331 96 ntBASIC2.31□□□□□ -2.04
U2AF1L4Q8WU68 Y_RNA.159-201ENST00000363674 87 ntBASIC2.31□□□□□ -2.04
U2AF1L4Q8WU68 RNU6-748P-201ENST00000384648 107 ntBASIC2.31□□□□□ -2.04
U2AF1L4Q8WU68 MIR10A-201ENST00000385043 110 ntBASIC2.31□□□□□ -2.04
U2AF1L4Q8WU68 CALM2P3-201ENST00000400429 449 ntBASIC2.31□□□□□ -2.04
U2AF1L4Q8WU68 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
U2AF1L4Q8WU68 USP9YP27-201ENST00000418455 438 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms