Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 CR769776.1-201ENST00000441254 787 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 GDI2P2-201ENST00000445131 608 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AL035666.1-201ENST00000446195 348 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AC245517.4-201ENST00000448601 281 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AC006026.2-201ENST00000457376 180 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 MTCYBP40-201ENST00000509390 1135 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AC108729.3-201ENST00000513484 108 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AC112206.4-201ENST00000515142 405 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 RNA5SP445-201ENST00000515889 115 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 RNVU1-2-201ENST00000516326 135 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 RNU7-51P-201ENST00000516560 62 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 SNORA43.2-201ENST00000516652 128 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 RNU6-965P-201ENST00000516721 96 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AP005597.4-201ENST00000526762 229 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AP003034.1-201ENST00000534621 422 ntBASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.33□□□□□ -2.2
CLHC1Q8NHS4 AC073343.1-201ENST00000328239 651 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 RNU6-23P-201ENST00000363283 107 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 RNU6-384P-201ENST00000364900 104 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 MTCYBP5-201ENST00000423752 1135 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 CBX3P6-201ENST00000430257 527 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 MTND1P20-201ENST00000430341 950 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 MTCO1P44-201ENST00000441935 243 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 RPL30P1-201ENST00000488676 339 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 Y_RNA.687-201ENST00000516558 91 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 RNU6-902P-201ENST00000517212 91 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 MIR4303-201ENST00000581299 66 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 MIR548AC-201ENST00000585049 88 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 U6.42-201ENST00000618440 107 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 AC007792.1-201ENST00000623023 402 ntBASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.32□□□□□ -2.2
CLHC1Q8NHS4 RNU6-743P-201ENST00000364151 106 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 RNU6-906P-201ENST00000384700 70 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 BTF3L4P1-201ENST00000413813 468 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 MTND4P20-201ENST00000424125 869 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 AL365400.1-201ENST00000431854 640 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 RPL37P21-201ENST00000435890 276 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 AC079448.1-201ENST00000449377 373 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 RPL30P6-201ENST00000475925 342 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 SNORA31.17-201ENST00000516953 127 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 BNIP3P6-201ENST00000549284 499 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 AC016727.1-205ENST00000605437 569 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 RMST_7.1-201ENST00000621935 268 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 AP000720.1-201ENST00000625091 483 ntBASIC1.31□□□□□ -2.2
CLHC1Q8NHS4 MIR378A-201ENST00000362177 66 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 U8.1-201ENST00000362843 134 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 RPS27AP14-201ENST00000422868 454 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 RPS15AP10-201ENST00000432472 382 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 MTND5P2-201ENST00000442927 1142 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AC093259.1-201ENST00000509755 300 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 ZNF519P3-201ENST00000557158 1032 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AC078795.2-201ENST00000602835 1252 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AL136363.2-201ENST00000604173 851 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AC092106.3-201ENST00000611308 722 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AC008993.2-201ENST00000631744 806 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 OR4G3P-201ENST00000633500 913 ntBASIC1.3□□□□□ -2.2
CLHC1Q8NHS4 AL391994.1-201ENST00000254724 282 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 RNU4-1-201ENST00000363925 141 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 MIR578-201ENST00000384828 96 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 RNU6-1176P-201ENST00000390955 107 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 RNA5SP213-201ENST00000391031 106 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 FGF7P8-201ENST00000402994 292 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 AL603825.1-201ENST00000438481 80 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 RNU6-333P-201ENST00000459117 107 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 MTCO2P29-201ENST00000465212 189 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 MTCYBP35-201ENST00000503630 1137 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 RNA5SP337-201ENST00000517007 109 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 RRN3P3-201ENST00000549207 578 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms