Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 Z99571.1-201ENST00000636677 394 ntBASIC3.41□□□□□ -1.86
SIMC1Q8NDZ2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SIMC1Q8NDZ2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIMC1Q8NDZ2 AC010615.1-201ENST00000594254 1764 ntBASIC3.4□□□□□ -1.86
SIMC1Q8NDZ2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
SIMC1Q8NDZ2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
SIMC1Q8NDZ2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 RNY1P16-201ENST00000363063 111 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.350-201ENST00000365409 98 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-395P-201ENST00000365662 106 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 RNA5SP354-201ENST00000391247 136 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AL353621.1-201ENST00000418219 243 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 DAP3P1-201ENST00000441522 278 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AC093852.1-201ENST00000503587 266 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 HMGN1P11-201ENST00000508668 303 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AC113155.1-201ENST00000511141 769 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AC091564.4-201ENST00000533934 2194 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AL391261.3-201ENST00000557194 520 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 U3.45-201ENST00000607547 219 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 SNORA50A-202ENST00000629536 136 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AP000553.6-201ENST00000641242 118 ntBASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.87
SIMC1Q8NDZ2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.26-201ENST00000362539 101 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.276-201ENST00000364732 109 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.324-201ENST00000365165 102 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.483-201ENST00000384380 101 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 MIR1302-6-201ENST00000408466 90 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-325P-201ENST00000411132 105 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 RNU2-64P-201ENST00000411315 191 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 RPS29P4-201ENST00000414733 161 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 AL714022.1-201ENST00000439897 151 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 OR2AQ1P-201ENST00000451972 200 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 MTCO3P8-201ENST00000453691 755 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 RN7SL442P-201ENST00000473804 320 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 FO393415.2-201ENST00000480085 343 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 SUMO2P6-201ENST00000505273 288 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 AC074250.1-201ENST00000511117 192 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 MTND1P19-201ENST00000511780 315 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 ACA59.1-201ENST00000515966 143 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 RNA5SP380-201ENST00000517190 98 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 MIR1273C-201ENST00000578669 77 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 MIR3128-201ENST00000581957 66 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 MIR4273-201ENST00000582824 84 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 KLKP1-201ENST00000595979 403 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 SRP72P2-201ENST00000344851 1979 ntBASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SIMC1Q8NDZ2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AL513302.2-201ENST00000562313 1842 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-283P-201ENST00000364788 107 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-806P-201ENST00000365147 105 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.376-201ENST00000365638 108 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 RNU1-73P-201ENST00000383971 164 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.551-201ENST00000384661 102 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-1179P-201ENST00000384667 107 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 SAR1AP2-201ENST00000392696 594 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AL035423.1-201ENST00000420331 213 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AL158156.1-201ENST00000422509 473 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 HMGN2P31-201ENST00000432430 273 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 MTND2P29-201ENST00000438595 412 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 RNU7-169P-201ENST00000459456 61 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AC008716.1-201ENST00000511084 513 ntBASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.38□□□□□ -1.87
SIMC1Q8NDZ2 SNORA25.11-201ENST00000515935 105 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms