Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC103705.1-201ENST00000619013 241 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 AC010378.1-201ENST00000619270 362 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
USP38Q8NB14 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP38Q8NB14 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
USP38Q8NB14 AC026241.1-201ENST00000517873 2142 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USP38Q8NB14 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.03□□□□□ -1.92
USP38Q8NB14 MIR26A1-201ENST00000362205 77 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 RNA5SP289-201ENST00000362332 137 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 SNORA32.2-201ENST00000384049 122 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 SNORD116-20-201ENST00000384529 92 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 MIR592-201ENST00000384959 97 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.03□□□□□ -1.92
USP38Q8NB14 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.03□□□□□ -1.92
USP38Q8NB14 AL365400.1-201ENST00000431854 640 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.03□□□□□ -1.92
USP38Q8NB14 OSTCP8-201ENST00000445117 448 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 FGF7P6-202ENST00000451282 293 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 AC006026.2-201ENST00000457376 180 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 HMGN2P26-201ENST00000463169 339 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 AC117503.1-201ENST00000472241 394 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 AC098799.2-201ENST00000509466 868 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.03□□□□□ -1.92
USP38Q8NB14 Y_RNA.665-201ENST00000516177 98 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 SCARNA17.1-201ENST00000516211 143 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 SCARNA17.2-201ENST00000516334 143 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 BTF3P12-201ENST00000519620 469 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 AC109329.2-201ENST00000519658 482 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 CYCSP27-201ENST00000527643 293 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 SCARNA17.4-201ENST00000614296 143 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
USP38Q8NB14 AC092608.2-201ENST00000624427 218 ntBASIC3.03□□□□□ -1.92
USP38Q8NB14 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP38Q8NB14 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP38Q8NB14 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
USP38Q8NB14 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.02□□□□□ -1.93
USP38Q8NB14 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
USP38Q8NB14 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP38Q8NB14 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP38Q8NB14 RNU6-527P-201ENST00000363425 104 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 RNU6-522P-201ENST00000364497 107 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 RNU6-1180P-201ENST00000364935 107 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 RNU2-25P-201ENST00000411041 191 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.02□□□□□ -1.93
USP38Q8NB14 AC009161.1-201ENST00000417306 376 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.02□□□□□ -1.93
USP38Q8NB14 AC007547.1-201ENST00000462177 490 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 RPL23AP49-201ENST00000492925 468 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.02□□□□□ -1.93
USP38Q8NB14 AC096725.1-201ENST00000514266 313 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 RNU5F-8P-201ENST00000515941 111 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USP38Q8NB14 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.02□□□□□ -1.93
USP38Q8NB14 MTCO3P13-201ENST00000577757 781 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 AL391813.1-201ENST00000603098 260 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 AC093913.1-201ENST00000614178 329 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 AC090617.10-201ENST00000624308 134 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 Z69720.2-201ENST00000624755 279 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 MIR7515-201ENST00000637837 67 ntBASIC3.02□□□□□ -1.93
USP38Q8NB14 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.02□□□□□ -1.93
USP38Q8NB14 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.01□□□□□ -1.93
USP38Q8NB14 ZNF519P1-201ENST00000449011 1626 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AC092593.1-201ENST00000515413 1815 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP38Q8NB14 Y_RNA.86-201ENST00000363020 111 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 EIF4E2P1-201ENST00000393781 255 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AL162578.1-201ENST00000406202 378 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 RNA5SP118-201ENST00000410385 109 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 HMGN2P3-201ENST00000433603 273 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 HMGN2P5-201ENST00000436882 273 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AC092473.1-201ENST00000441098 221 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AP001324.2-201ENST00000461163 319 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 MED28P2-201ENST00000475771 317 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 RPL23AP45-201ENST00000476406 468 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 RPS29P25-201ENST00000481709 171 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AC103975.1-201ENST00000482506 483 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.01□□□□□ -1.93
USP38Q8NB14 SNORA43.2-201ENST00000516652 128 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AC023050.3-201ENST00000541142 333 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 GLYCAM1-201ENST00000546596 285 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AC025423.5-201ENST00000550230 219 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AC009163.5-201ENST00000575421 637 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.01□□□□□ -1.93
USP38Q8NB14 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.01□□□□□ -1.93
USP38Q8NB14 AC010620.2-201ENST00000600135 313 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AL670379.10-201ENST00000604330 253 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 CTHRC1P1-201ENST00000605383 469 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 AL670379.9-201ENST00000605428 253 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
USP38Q8NB14 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.01□□□□□ -1.93
USP38Q8NB14 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3□□□□□ -1.93
USP38Q8NB14 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3□□□□□ -1.93
USP38Q8NB14 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3□□□□□ -1.93
USP38Q8NB14 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3□□□□□ -1.93
USP38Q8NB14 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USP38Q8NB14 RNU6-78P-201ENST00000362897 107 ntBASIC3□□□□□ -1.93
USP38Q8NB14 RNU6-942P-201ENST00000363002 107 ntBASIC3□□□□□ -1.93
USP38Q8NB14 Y_RNA.338-201ENST00000365320 114 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms