Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 MIR4775-201ENST00000581168 75 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 AC011494.1-201ENST00000596454 237 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 AL670379.4-201ENST00000605279 254 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 SCARNA4-202ENST00000625402 129 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 FARSBP1-201ENST00000435808 1778 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 RNA5SP276-201ENST00000362580 94 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 Y_RNA.169-201ENST00000363745 96 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 RNU6-607P-201ENST00000411283 108 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 RNU6-387P-201ENST00000411331 105 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 RNA5SP111-201ENST00000411386 101 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 OR6C66P-201ENST00000414917 930 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 RPL31P35-201ENST00000431058 377 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 SNORA4.4-201ENST00000515921 135 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 SNORD27.1-201ENST00000516319 72 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 IMMP1LP2-201ENST00000552954 492 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 AC010928.2-201ENST00000588017 287 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 CLIC4P2-201ENST00000601934 717 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 AC073410.2-201ENST00000603240 332 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 AC064872.1-201ENST00000604823 1072 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 uc_338.15-201ENST00000615470 191 ntBASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC65Q8IXS2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 FGF7P2-201ENST00000332473 296 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 MIR1-2-201ENST00000384961 85 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 RNU6-550P-201ENST00000391057 101 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 HMGN2P39-201ENST00000398005 273 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 SNRPGP9-201ENST00000456025 225 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 RNA5SP269-201ENST00000459032 137 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 snoU13.14-201ENST00000459372 104 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 snoU13.26-201ENST00000459452 105 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 MTND3P7-201ENST00000474435 343 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 AL121594.1-201ENST00000475906 575 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 AC104806.1-201ENST00000508720 308 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 MTCYBP40-201ENST00000509390 1135 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 MTCO3P28-201ENST00000513351 515 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 RNA5SP137-201ENST00000516833 135 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 AC034114.1-201ENST00000520293 285 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 AC107953.1-201ENST00000522216 297 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 NDUFA5P6-201ENST00000542110 379 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 MIR3682-201ENST00000581338 84 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 AC098848.2-201ENST00000588023 330 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 MIR8081-201ENST00000611533 95 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 AL159153.1-201ENST00000619688 317 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 AC120349.3-201ENST00000624377 529 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.86□□□□□ -2.11
CCDC65Q8IXS2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 OR4G2P-201ENST00000328113 903 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 RNU6-282P-201ENST00000365357 103 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 RNU6-108P-201ENST00000365558 107 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 RNU6-997P-201ENST00000384725 107 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 MIR561-201ENST00000385216 97 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 SNORA26.9-201ENST00000391322 122 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 RNA5SP390-201ENST00000410191 113 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 RNU2-23P-201ENST00000410545 195 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AC138623.1-201ENST00000418060 216 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AL669831.1-202ENST00000428504 417 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 HSPE1P21-201ENST00000438283 308 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 GTF2IP13-201ENST00000438487 386 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AC007969.2-201ENST00000441891 191 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 PPP1R2P5-201ENST00000457256 603 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AL162395.1-201ENST00000457882 422 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AC116337.1-201ENST00000509680 687 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 RNU6-410P-201ENST00000517006 107 ntBASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC65Q8IXS2 AC145350.1-201ENST00000567426 208 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms