Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RNU6-234P-201ENST00000365229 104 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 MIR518A2-201ENST00000384966 87 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 CBX3P9-201ENST00000402326 552 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 RNU2-48P-201ENST00000410694 191 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 RNU2-32P-201ENST00000411193 191 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-607P-201ENST00000411283 108 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 OR9R1P-201ENST00000412200 877 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 CYCSP33-201ENST00000414485 327 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AL137159.1-201ENST00000452808 512 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AL353752.1-201ENST00000454946 260 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 snoU13.14-201ENST00000459372 104 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 SNORD42A-201ENST00000459584 64 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 MTCYBP40-201ENST00000509390 1135 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 SNORA18.6-201ENST00000516792 115 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 CYCSP27-201ENST00000527643 293 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AP000763.2-201ENST00000540641 163 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AC026271.5-201ENST00000577873 130 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AC064872.1-201ENST00000604823 1072 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AL670379.2-201ENST00000604983 252 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AC091931.1-201ENST00000623488 728 ntBASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NUDCD3Q8IVD9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 FGF7P2-201ENST00000332473 296 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-1287P-201ENST00000362914 107 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-944P-201ENST00000364023 107 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 RNU5E-7P-201ENST00000365290 117 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-45P-201ENST00000384471 107 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-1060P-201ENST00000384664 107 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 RNY3P10-201ENST00000384764 102 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 MIR1-2-201ENST00000384961 85 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AL079342.1-201ENST00000401460 267 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 BTF3L4P1-201ENST00000413813 468 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AL158823.1-201ENST00000418441 478 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 HSPE1P21-201ENST00000438283 308 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 RPL23AP6-201ENST00000446637 472 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 RPL38P4-201ENST00000502376 214 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 SNORD27.1-201ENST00000516319 72 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AP003072.2-201ENST00000527756 676 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AC078795.2-201ENST00000602835 1252 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AL078605.1-201ENST00000603529 500 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 SNRPGP17-201ENST00000603780 214 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AL159153.1-201ENST00000619688 317 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 ZNF355P-201ENST00000427301 3216 ntBASIC1.75□□□□□ -2.13
NUDCD3Q8IVD9 AC002543.1-201ENST00000299783 1954 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 snoU2_19.1-201ENST00000362361 80 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 SNORD115-3-201ENST00000363100 82 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-108P-201ENST00000365558 107 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 MIR454-201ENST00000390180 115 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-248P-201ENST00000410720 107 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AC006512.1-201ENST00000468816 291 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AC010486.2-201ENST00000505572 483 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AC074344.1-201ENST00000512823 224 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 MIR4775-201ENST00000581168 75 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 Z84480.1-201ENST00000605131 311 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AC004908.3-201ENST00000610248 625 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AC007792.1-201ENST00000623023 402 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 AC097372.5-201ENST00000623665 376 ntBASIC1.74□□□□□ -2.13
NUDCD3Q8IVD9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-715P-201ENST00000365204 103 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-282P-201ENST00000365357 103 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 RNU6-546P-201ENST00000383991 107 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 AL356432.1-201ENST00000405809 419 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 BX295541.1-201ENST00000417774 250 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 AC244636.1-201ENST00000421152 228 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 AC007969.2-201ENST00000441891 191 ntBASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.73□□□□□ -2.13
NUDCD3Q8IVD9 RNA5SP269-201ENST00000459032 137 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms