Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNY1-201ENST00000364228 113 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 Y_RNA.352-201ENST00000365439 102 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 RNU6-622P-201ENST00000384272 103 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 MIR7-3-201ENST00000384898 110 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 MIR1271-201ENST00000408537 86 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 AC244670.1-201ENST00000436879 112 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 U3.44-201ENST00000458938 192 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 AP001025.1-201ENST00000486139 332 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 RNA5SP179-201ENST00000517284 121 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 MRPS36P4-201ENST00000534436 298 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 AC091167.4-201ENST00000605079 184 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 AC069200.1-201ENST00000609511 323 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 AC127459.3-201ENST00000624328 466 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 ZNF826P-207ENST00000622273 1910 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AC092435.4-201ENST00000623012 4159 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 Y_RNA.16-201ENST00000362421 102 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 RNA5SP119-201ENST00000362715 117 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 RNA5SP97-201ENST00000365006 84 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 SNORD58.1-201ENST00000391313 66 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AL138752.1-201ENST00000452964 351 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AC087477.1-201ENST00000465747 340 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 RPL30P1-201ENST00000488676 339 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AC010469.2-201ENST00000496412 480 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 RNU4-71P-201ENST00000516258 113 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 SNORD59.2-201ENST00000516873 68 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 RNU6-1198P-201ENST00000516904 67 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 RNU6-255P-201ENST00000516957 105 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 Y_RNA.713-201ENST00000517013 96 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AC026403.1-201ENST00000518938 295 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 YPEL5P3-201ENST00000547227 352 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AL138963.2-201ENST00000605137 226 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AL359198.2-201ENST00000611836 194 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 AC011266.1-201ENST00000624119 3569 ntBASIC4.32□□□□□ -1.72
NPAS4Q8IUM7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 AC091152.2-201ENST00000591628 2569 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 Y_RNA.358-201ENST00000365491 99 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 SNORA29-201ENST00000384183 140 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 RNU6-541P-201ENST00000384709 110 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 MIR32-201ENST00000384965 70 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 SNORD115-46-201ENST00000390982 71 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 RNA5SP354-201ENST00000391247 136 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 EI24P2-201ENST00000397776 1076 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 MIR548I2-201ENST00000408348 149 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 MIR1183-201ENST00000408856 89 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 AL139156.1-201ENST00000412785 841 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 AL606753.1-201ENST00000427435 87 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 TOMM22P6-201ENST00000465035 409 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 RPL30P12-201ENST00000474666 353 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 RPS4XP22-201ENST00000480755 780 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 AC067942.3-201ENST00000512025 362 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 AC090617.3-201ENST00000573670 475 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 MIR5571-201ENST00000577998 113 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 MIR432-201ENST00000606207 94 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NPAS4Q8IUM7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.3□□□□□ -1.72
NPAS4Q8IUM7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms