Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNU1-83P-201ENST00000363426 164 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 SNORD116-14-201ENST00000383894 92 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 SNORD116-17-201ENST00000383929 92 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 SNORD116-15-201ENST00000384445 92 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 SNORD116-19-201ENST00000384729 92 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 RNU2-52P-201ENST00000410680 190 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 SEPT7P4-201ENST00000437076 306 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 RPL39P29-201ENST00000447779 157 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 RNU6-625P-201ENST00000459412 107 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 AC084357.1-201ENST00000473404 255 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 AC005840.1-201ENST00000498412 377 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 HMGB3P3-201ENST00000510526 400 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 AL133393.1-201ENST00000603277 287 ntBASIC4.73□□□□□ -1.65
RNF135Q8IUD6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF135Q8IUD6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF135Q8IUD6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF135Q8IUD6 Y_RNA.23-201ENST00000362496 106 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 RNU6-1285P-201ENST00000363480 105 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 Y_RNA.357-201ENST00000365487 109 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 MIR200C-201ENST00000384980 68 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 RPL21P17-201ENST00000397467 475 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 RPS26P2-201ENST00000440331 348 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 IFNA11P-201ENST00000446352 526 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.72□□□□□ -1.65
RNF135Q8IUD6 AL137159.1-201ENST00000452808 512 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 PRSS3P4-201ENST00000453323 162 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 RPS29P20-201ENST00000489592 171 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF135Q8IUD6 SNORA72.7-201ENST00000516349 94 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 AC018448.1-201ENST00000552843 316 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 TGIF1P1-201ENST00000558095 802 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF135Q8IUD6 MTND6P33-201ENST00000571794 183 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.72□□□□□ -1.65
RNF135Q8IUD6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF135Q8IUD6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF135Q8IUD6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
RNF135Q8IUD6 ADAM3A-203ENST00000461344 2157 ntBASIC4.71□□□□□ -1.65
RNF135Q8IUD6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 Y_RNA.179-201ENST00000363844 90 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 Y_RNA.412-201ENST00000384001 104 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 SDHCP2-201ENST00000398565 501 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 RNA5SP390-201ENST00000410191 113 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 RPL30P12-201ENST00000474666 353 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 AC026726.1-201ENST00000512859 601 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 RNU6-966P-201ENST00000516479 104 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 AC021739.1-201ENST00000559631 174 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 MIR548X2-201ENST00000579776 100 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 AC090897.2-201ENST00000581715 130 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 AC007656.2-201ENST00000624902 4547 ntBASIC4.71□□□□□ -1.66
RNF135Q8IUD6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF135Q8IUD6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF135Q8IUD6 MAPK10-320ENST00000641462 6696 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 MAPK10-303ENST00000641324 3959 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 AL672296.1-201ENST00000427780 2158 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF135Q8IUD6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
RNF135Q8IUD6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF135Q8IUD6 RNU4-80P-201ENST00000363200 141 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 RNA5SP513-201ENST00000364648 118 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 AL357075.1-201ENST00000404107 726 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF135Q8IUD6 RNA5SP239-201ENST00000410218 129 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF135Q8IUD6 RNA5SP310-201ENST00000459084 116 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 AC146944.2-203ENST00000502493 354 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF135Q8IUD6 AC139495.1-202ENST00000513164 354 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 RNU6-191P-201ENST00000516295 94 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 AC069200.1-201ENST00000609511 323 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 MIR6875-201ENST00000617506 72 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 MIR8059-201ENST00000620427 81 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF135Q8IUD6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF135Q8IUD6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF135Q8IUD6 MFSD8-242ENST00000641690 4199 ntBASIC4.7□□□□□ -1.66
RNF135Q8IUD6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms