Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.16□□□□□ -2.22
SCXQ7RTU7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.16□□□□□ -2.22
SCXQ7RTU7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.16□□□□□ -2.22
SCXQ7RTU7 DEFB131E-202ENST00000602581 683 ntBASIC1.16□□□□□ -2.22
SCXQ7RTU7 AL136363.2-201ENST00000604173 851 ntBASIC1.16□□□□□ -2.22
SCXQ7RTU7 AC016727.1-205ENST00000605437 569 ntBASIC1.16□□□□□ -2.22
SCXQ7RTU7 RMST_4.1-201ENST00000616886 107 ntBASIC1.16□□□□□ -2.22
SCXQ7RTU7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
SCXQ7RTU7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 RNU1-58P-201ENST00000362413 163 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 RPS3AP36-201ENST00000398190 775 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 RNU6-387P-201ENST00000411331 105 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 AL589872.1-201ENST00000426602 288 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 CBX3P6-201ENST00000430257 527 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 RN7SKP210-201ENST00000459176 261 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 RPS29P11-201ENST00000496507 171 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 MTCYBP40-201ENST00000509390 1135 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 MTND2P7-201ENST00000521337 640 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
SCXQ7RTU7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 AC008521.1-201ENST00000587471 187 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 AC012065.4-201ENST00000602445 679 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 WISP1-OT1-201ENST00000602893 642 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 MIR8081-201ENST00000611533 95 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 MIR7844-201ENST00000616161 122 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 AC099842.1-201ENST00000619919 596 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 AL157786.1-207ENST00000627771 695 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 AC007671.2-201ENST00000637344 619 ntBASIC1.15□□□□□ -2.23
SCXQ7RTU7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SCXQ7RTU7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.15□□□□□ -2.23
SCXQ7RTU7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SCXQ7RTU7 Y_RNA.22-201ENST00000362492 102 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 RNU6-212P-201ENST00000362642 104 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 Y_RNA.99-201ENST00000363138 105 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 SNORA16.1-201ENST00000364597 132 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 RNU6-61P-201ENST00000365528 109 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SCXQ7RTU7 MIR30A-201ENST00000385092 71 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 RNU6-955P-201ENST00000410497 104 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC108667.1-201ENST00000428618 249 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 IFNA20P-201ENST00000436840 528 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC007969.2-201ENST00000441891 191 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 MTCO3P9-201ENST00000506989 781 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC096745.1-201ENST00000509945 370 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AF131216.2-201ENST00000512316 564 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC108729.3-201ENST00000513484 108 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 RNU1-86P-201ENST00000516108 154 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 RNU1-107P-201ENST00000516617 154 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 RNU6-965P-201ENST00000516721 96 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 RNU6-685P-201ENST00000517088 95 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 MRPS36P3-201ENST00000519284 130 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 MTND2P32-201ENST00000521584 1038 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC022878.1-201ENST00000530684 149 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC022880.1-201ENST00000534017 973 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 ELOCP32-201ENST00000548625 324 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.14□□□□□ -2.23
SCXQ7RTU7 MIR5692A1-201ENST00000580523 69 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC245884.10-201ENST00000597355 337 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 CYP2C61P-201ENST00000604072 290 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 AC010900.2-201ENST00000604508 210 ntBASIC1.14□□□□□ -2.23
SCXQ7RTU7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SCXQ7RTU7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
SCXQ7RTU7 SNORD56.1-201ENST00000362913 68 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.13□□□□□ -2.23
SCXQ7RTU7 SNORA17.3-201ENST00000391159 129 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 RPL23AP32-201ENST00000395315 459 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 MIR1294-201ENST00000408503 142 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 Y_RNA.595-201ENST00000410403 105 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 RPL23AP36-201ENST00000413895 458 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.13□□□□□ -2.23
SCXQ7RTU7 ELOCP4-201ENST00000420090 333 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC007283.2-201ENST00000424739 197 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 RPS15AP10-201ENST00000432472 382 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 HMGB1P31-201ENST00000437242 427 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.13□□□□□ -2.23
SCXQ7RTU7 RPL30P6-201ENST00000475925 342 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 FAM206BP-201ENST00000510179 541 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC107393.1-201ENST00000512403 346 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.13□□□□□ -2.23
SCXQ7RTU7 RNU6-250P-201ENST00000516958 103 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms