Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-626P-201ENST00000363354 107 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.292-201ENST00000364904 97 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 RNY4P28-201ENST00000365281 93 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 RNU6-47P-201ENST00000383866 107 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 SNORA36A-201ENST00000384221 132 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 MIR544A-201ENST00000384855 91 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 MIR3074-201ENST00000384885 81 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 HLFP1-201ENST00000402375 499 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 MIR1183-201ENST00000408856 89 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 AC074117.2-201ENST00000417130 397 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 RPL23AP95-201ENST00000426806 265 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 VDAC1P3-201ENST00000434069 851 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 GPM6BP3-201ENST00000442797 145 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 HMGB3P8-201ENST00000449709 577 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.679-201ENST00000516416 91 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.683-201ENST00000516508 93 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 MIR2116-201ENST00000517221 80 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 AC022559.1-201ENST00000520905 205 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 HSPE1P4-201ENST00000550617 308 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 MIR6134-201ENST00000617606 109 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 LINC02471-203ENST00000641941 4752 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 RNA5SP130-201ENST00000364431 114 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 RNU6-281P-201ENST00000384212 103 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.506-201ENST00000384494 102 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 RNU6-125P-201ENST00000384505 107 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 MIR607-201ENST00000385241 96 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 FTH1P15-201ENST00000406984 280 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 RNA5SP317-201ENST00000410176 116 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 RNA5SP311-201ENST00000411290 116 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 AC007969.2-201ENST00000441891 191 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 AC097462.2-201ENST00000504623 481 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 RNA5SP315-201ENST00000516340 116 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 RNU6-567P-201ENST00000516746 107 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 RNA5SP312-201ENST00000517068 116 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 AK6P2-201ENST00000549020 471 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 MIR4423-201ENST00000580922 80 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 Z83818.1-201ENST00000603584 150 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 AC012468.1-201ENST00000604888 430 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
RNF111Q6ZNA4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.122-201ENST00000363331 96 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 RNU6-1020P-201ENST00000363684 107 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 RNU6-961P-201ENST00000363893 105 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.418-201ENST00000384029 102 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 RNU6-20P-201ENST00000384106 107 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 RNU6-514P-201ENST00000384208 107 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 RNU6-159P-201ENST00000391080 106 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.590-201ENST00000410140 107 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 AL356095.1-201ENST00000417217 199 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 snoU13.6-201ENST00000458785 104 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 AC117440.1-201ENST00000474107 571 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 RPS4XP22-201ENST00000480755 780 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 MRPL42P6-201ENST00000486397 371 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 RNU6-1212P-201ENST00000517023 104 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 RNU6-58P-201ENST00000517143 103 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 AC110741.2-201ENST00000605278 268 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 AL391261.4-201ENST00000616012 481 ntBASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF111Q6ZNA4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms