Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 SNORD114-3-201ENST00000364969 75 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 RNU4-12P-201ENST00000365233 139 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 RNY3P5-201ENST00000384127 102 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 RNU6-441P-201ENST00000384545 106 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 RNU6-160P-201ENST00000384591 107 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 MIR200A-201ENST00000384875 90 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 AL109755.1-201ENST00000401791 649 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 snoU13.9-201ENST00000458927 103 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 LSM6P2-201ENST00000552208 177 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 MTCO2P2-201ENST00000591258 225 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 AP001596.2-201ENST00000608410 312 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 uc_338.34-201ENST00000617467 174 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 MIR6134-201ENST00000617606 109 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 AC009950.2-201ENST00000636548 183 ntBASIC0.11□□□□□ -2.39
CSPG4Q6UVK1 OR5T3-201ENST00000303059 1023 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 RNA5SP327-201ENST00000362494 101 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 RNU4-9P-201ENST00000364951 139 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 MIR194-1-201ENST00000384892 85 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 RNU6-360P-201ENST00000390944 104 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 BTF3P8-201ENST00000414577 526 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 TAF13P2-201ENST00000416876 286 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC084024.2-201ENST00000503480 791 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC025465.4-201ENST00000513422 638 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 SNORA31.4-201ENST00000516049 129 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 RNU6-889P-201ENST00000517189 103 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AP001893.2-201ENST00000526949 202 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC008088.1-201ENST00000580993 280 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC068790.6-201ENST00000602558 258 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AP000860.1-201ENST00000605250 559 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AL132822.1-201ENST00000617063 513 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AL109620.1-201ENST00000618738 1197 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC123767.1-202ENST00000620407 817 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AP003400.6-201ENST00000624698 740 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 ZNF849P-201ENST00000594711 1566 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 MIR101-1-201ENST00000362265 75 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 MIR597-201ENST00000384968 97 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 MIR518A1-201ENST00000385068 85 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 VPS26BP1-201ENST00000417155 755 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 PTGES3P4-201ENST00000426243 356 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC112492.4-201ENST00000456549 352 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 RPL7P43-201ENST00000478876 753 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 RPL22P13-201ENST00000493291 347 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 RN7SKP258-201ENST00000517151 304 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC005951.2-201ENST00000576282 495 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC069304.2-201ENST00000605154 435 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 HMGB1P51-201ENST00000605166 638 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC023934.1-201ENST00000574529 2389 ntBASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.1□□□□□ -2.39
CSPG4Q6UVK1 RNA5SP361-201ENST00000362686 118 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 Y_RNA.413-201ENST00000384007 102 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 RNU6-505P-201ENST00000384427 107 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 MIR938-201ENST00000401216 83 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 RAB28P5-201ENST00000427490 651 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 UBE2V1P8-201ENST00000437166 265 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AC004865.1-201ENST00000442276 1003 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AL050341.1-201ENST00000447743 313 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 Y_RNA.754-201ENST00000476024 102 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AC010587.2-201ENST00000511727 448 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 RNA5SP437-201ENST00000517249 129 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AC141557.1-201ENST00000540982 400 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AC079598.5-201ENST00000547460 117 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AP003465.2-201ENST00000602571 373 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AP000811.1-201ENST00000603803 651 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 BNIP3P31-201ENST00000604515 566 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 Y_RNA.790-201ENST00000614282 102 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 Y_RNA.782-201ENST00000614695 102 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 AC092608.3-201ENST00000625017 386 ntBASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.09□□□□□ -2.39
CSPG4Q6UVK1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 RNU5E-1-201ENST00000362477 120 ntBASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 RNU6-1078P-201ENST00000364522 103 ntBASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 MIR135A2-201ENST00000384854 100 ntBASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 AC119618.1-201ENST00000434191 222 ntBASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 RPL30P1-201ENST00000488676 339 ntBASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 AL049874.1-201ENST00000489560 388 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms