Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL391813.1-201ENST00000603098 260 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 AC093788.1-201ENST00000609356 927 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 SCARNA17.4-201ENST00000614296 143 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 RMST_4.1-201ENST00000616886 107 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 U6.42-201ENST00000618440 107 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 MIR6132-201ENST00000622083 109 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 MIR219B-201ENST00000637023 88 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.54□□□□□ -2
CTR9Q6PD62 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CTR9Q6PD62 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.53□□□□□ -2
CTR9Q6PD62 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CTR9Q6PD62 RNU6-1303P-201ENST00000364841 107 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CTR9Q6PD62 SNORA69-201ENST00000383895 132 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 Y_RNA.481-201ENST00000384373 102 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 SNORD70.1-201ENST00000391007 85 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.53□□□□□ -2
CTR9Q6PD62 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.53□□□□□ -2
CTR9Q6PD62 BTF3P15-201ENST00000455606 336 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 SNRPFP3-201ENST00000457792 225 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 SCARNA18-201ENST00000459004 134 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 snoU13.15-201ENST00000459407 104 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.53□□□□□ -2
CTR9Q6PD62 AC082651.2-201ENST00000496833 166 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 YWHAEP4-201ENST00000505390 198 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 AC116655.1-201ENST00000508324 901 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.53□□□□□ -2
CTR9Q6PD62 RNU2-69P-201ENST00000516061 100 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 RNU6-314P-201ENST00000516574 104 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 AL512360.1-201ENST00000555346 234 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 HMGB1P33-201ENST00000563485 527 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 AC007151.1-201ENST00000572774 483 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 MIR4448-201ENST00000584360 86 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 MIR4424-201ENST00000585257 86 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 AC087045.1-201ENST00000605856 382 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 AC012557.2-201ENST00000605919 418 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
CTR9Q6PD62 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.53□□□□□ -2
CTR9Q6PD62 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 RNU6-1215P-201ENST00000384441 102 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 Y_RNA.554-201ENST00000384672 102 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 MIR10A-201ENST00000385043 110 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 CIR1P3-201ENST00000405137 479 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 MTCO1P21-201ENST00000416634 589 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 snoU109.2-201ENST00000459316 135 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 RNU6-261P-201ENST00000459506 102 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 LRRC34P2-201ENST00000514850 553 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 MIR892C-201ENST00000516410 77 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 MIR514B-201ENST00000516774 80 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 Y_RNA.704-201ENST00000516851 102 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 IGKV3-31-201ENST00000523109 329 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 MTCO3P23-201ENST00000561363 289 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 MIR5002-201ENST00000584713 97 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 AC025165.5-201ENST00000602802 578 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 AL021997.1-201ENST00000605757 193 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 AC098679.4-201ENST00000624241 654 ntBASIC2.52□□□□□ -2.01
CTR9Q6PD62 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CTR9Q6PD62 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 RNU6-942P-201ENST00000363002 107 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 SNORA3A-201ENST00000364113 130 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 RNU6-483P-201ENST00000384088 108 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 RNU6-72P-201ENST00000384285 79 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 RNU6-393P-201ENST00000384475 107 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 MIR181A1-201ENST00000385026 110 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 RNU6-648P-201ENST00000410190 107 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 RNU2-2P-201ENST00000410396 191 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 BX276092.3-201ENST00000424182 230 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 HMGB1P30-201ENST00000492455 606 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 CCDC34P1-201ENST00000507441 517 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 SNORA31.6-201ENST00000516241 130 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 BNIP3P6-201ENST00000549284 499 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 AL138976.2-201ENST00000563989 694 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.51□□□□□ -2.01
CTR9Q6PD62 AL121917.1-203ENST00000605534 577 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 U2.15-201ENST00000611544 191 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 U2.16-201ENST00000613119 191 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 U2.12-201ENST00000613778 191 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 U2.20-201ENST00000613956 192 ntBASIC2.51□□□□□ -2.01
CTR9Q6PD62 U2.9-201ENST00000615427 191 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms