Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 SNORA70.2-201ENST00000364506 135 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 RNU4-9P-201ENST00000364951 139 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 RNU1-100P-201ENST00000365255 165 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 RNU2-38P-201ENST00000410856 79 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 RN7SKP58-201ENST00000411010 305 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 NDUFS5P4-201ENST00000412983 318 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 RPL21P40-201ENST00000428586 483 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 CYCSP32-201ENST00000440548 321 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 AL353705.4-201ENST00000449661 238 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 HMGN1P18-201ENST00000457642 277 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 snoU13.30-201ENST00000458951 104 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 RNU6-1132P-201ENST00000459214 107 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 RPS27P29-201ENST00000463110 252 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 RPS27AP10-201ENST00000496103 208 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 AC006445.2-201ENST00000510061 472 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 AP003733.2-201ENST00000529409 171 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 TOMM20P2-201ENST00000540082 421 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.81□□□□□ -1.8
E4F1Q66K89 AL451007.1-201ENST00000595491 289 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 MIR6134-201ENST00000617606 109 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 AC024581.2-201ENST00000619986 252 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 AC073308.1-201ENST00000623696 305 ntBASIC3.81□□□□□ -1.8
E4F1Q66K89 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
E4F1Q66K89 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
E4F1Q66K89 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
E4F1Q66K89 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
E4F1Q66K89 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
E4F1Q66K89 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.8□□□□□ -1.8
E4F1Q66K89 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.8□□□□□ -1.8
E4F1Q66K89 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.8□□□□□ -1.8
E4F1Q66K89 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.8□□□□□ -1.8
E4F1Q66K89 OTUD4P1-201ENST00000237841 3067 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.8□□□□□ -1.8
E4F1Q66K89 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
E4F1Q66K89 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.8□□□□□ -1.8
E4F1Q66K89 AC007496.3-201ENST00000624987 3443 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
E4F1Q66K89 SNORD9-201ENST00000362566 104 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 RNA5SP515-201ENST00000364570 118 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 RNU6-1280P-201ENST00000365211 107 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 RPL21P75-201ENST00000396599 483 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 RPL21P28-201ENST00000401418 483 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 FTH1P15-201ENST00000406984 280 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 RNU6-130P-201ENST00000411112 103 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.8□□□□□ -1.8
E4F1Q66K89 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.8□□□□□ -1.8
E4F1Q66K89 AC099548.1-201ENST00000421443 426 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 AL358453.1-201ENST00000422522 250 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 AL590556.1-201ENST00000423231 483 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 RPL23AP82-202ENST00000427528 469 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.8□□□□□ -1.8
E4F1Q66K89 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.8□□□□□ -1.8
E4F1Q66K89 RPL21P39-201ENST00000463605 483 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 CENPBD1P1-201ENST00000464061 469 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 AC087190.1-201ENST00000484462 480 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 AC107032.1-201ENST00000485945 480 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 AC132942.1-201ENST00000486753 483 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 AC093591.1-201ENST00000491435 481 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 RPL21P16-201ENST00000495531 483 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 ANXA2P1-201ENST00000505539 926 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 AC107222.1-201ENST00000510899 637 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.8□□□□□ -1.8
E4F1Q66K89 RNU6-581P-201ENST00000516214 105 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 SNORA70.19-201ENST00000516717 90 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 AC068657.1-201ENST00000520807 306 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 AC007224.1-201ENST00000564410 144 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
E4F1Q66K89 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
E4F1Q66K89 CUL1P1-201ENST00000509510 2425 ntBASIC3.8□□□□□ -1.8
E4F1Q66K89 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
E4F1Q66K89 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
E4F1Q66K89 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
E4F1Q66K89 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
E4F1Q66K89 SNORD56.3-201ENST00000363507 71 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 Y_RNA.350-201ENST00000365409 98 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 RPL21P17-201ENST00000397467 475 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.79□□□□□ -1.8
E4F1Q66K89 AC009296.1-201ENST00000443146 155 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 AL031659.1-201ENST00000447075 539 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.79□□□□□ -1.8
E4F1Q66K89 HMGN2P16-201ENST00000456802 261 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 LINC01399-202ENST00000458450 244 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 SNORD127-201ENST00000458892 86 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 U8.22-201ENST00000459141 133 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 AC091874.1-201ENST00000511402 339 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 SNORA64.4-201ENST00000516632 81 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.79□□□□□ -1.8
E4F1Q66K89 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.79□□□□□ -1.8
E4F1Q66K89 AL442163.3-201ENST00000554110 156 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 AC136624.4-201ENST00000573044 370 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.79□□□□□ -1.8
E4F1Q66K89 AC073410.2-201ENST00000603240 332 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 AC078938.1-201ENST00000620993 318 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 U4.6-201ENST00000621618 127 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 AC048347.1-201ENST00000624621 427 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.79□□□□□ -1.8
E4F1Q66K89 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
E4F1Q66K89 ADAM3A-203ENST00000461344 2157 ntBASIC3.79□□□□□ -1.8
E4F1Q66K89 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.79□□□□□ -1.8
E4F1Q66K89 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms