Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 AP006437.1-201ENST00000641440 3685 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 Z82209.1-201ENST00000422141 2135 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 ZNF271P-202ENST00000465539 1970 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 RNU1-23P-201ENST00000363361 144 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 SNORA5B-201ENST00000363786 132 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 RPS29P13-201ENST00000402041 169 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 AL356057.3-201ENST00000402607 340 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 AL139095.1-201ENST00000404326 391 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 RNU6-648P-201ENST00000410190 107 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 RNA5SP21-201ENST00000410917 96 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 AL590556.1-201ENST00000423231 483 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.8□□□□□ -1.96
ALFQ53S48 MTND3P21-201ENST00000433774 331 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.8□□□□□ -1.96
ALFQ53S48 AC108938.1-201ENST00000451204 136 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 AC008571.1-201ENST00000467232 300 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.8□□□□□ -1.96
ALFQ53S48 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.8□□□□□ -1.96
ALFQ53S48 Y_RNA.654-201ENST00000497848 106 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 HMGB3P3-201ENST00000510526 400 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 RNU6-826P-201ENST00000516827 104 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 RN7SKP256-201ENST00000517201 314 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.8□□□□□ -1.96
ALFQ53S48 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.8□□□□□ -1.96
ALFQ53S48 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.8□□□□□ -1.96
ALFQ53S48 AC025165.5-201ENST00000602802 578 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 AC012557.2-201ENST00000605919 418 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 AC103705.1-201ENST00000619013 241 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.8□□□□□ -1.96
ALFQ53S48 MIR6733-201ENST00000635723 61 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 FO624990.1-201ENST00000636373 85 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 AC241585.2-209ENST00000638217 143 ntBASIC2.8□□□□□ -1.96
ALFQ53S48 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
ALFQ53S48 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
ALFQ53S48 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ALFQ53S48 snoU2_19.1-201ENST00000362361 80 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 SNORA3A-201ENST00000364113 130 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 SNORA25B-201ENST00000365507 128 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 RNU6-692P-201ENST00000384496 107 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 RNU6-1274P-201ENST00000384557 107 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 RNU2-52P-201ENST00000410680 190 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 RNA5SP270-201ENST00000411361 118 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 AF274854.1-201ENST00000413236 615 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.79□□□□□ -1.96
ALFQ53S48 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.79□□□□□ -1.96
ALFQ53S48 IFNA11P-201ENST00000446352 526 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 MTND3P16-201ENST00000452205 344 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 Y_RNA.704-201ENST00000516851 102 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 SNORD60.2-201ENST00000516883 86 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.79□□□□□ -1.96
ALFQ53S48 MIR4319-201ENST00000577285 85 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 MIR4446-201ENST00000578505 67 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 MIR3605-201ENST00000583214 100 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 AC092954.2-201ENST00000609103 430 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 YWHAEP7-203ENST00000622054 312 ntBASIC2.79□□□□□ -1.96
ALFQ53S48 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
ALFQ53S48 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.79□□□□□ -1.96
ALFQ53S48 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ALFQ53S48 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
ALFQ53S48 Y_RNA.41-201ENST00000362646 102 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 Y_RNA.372-201ENST00000365599 102 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 RNU4-20P-201ENST00000365601 151 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 Y_RNA.378-201ENST00000365652 113 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 RNU6-780P-201ENST00000391030 104 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 AL590002.1-201ENST00000406554 418 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 RPS15AP10-201ENST00000432472 382 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 AL353752.1-201ENST00000454946 260 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.78□□□□□ -1.96
ALFQ53S48 SNORD109B-201ENST00000458961 67 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 SNORD109A-201ENST00000459128 67 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 RPS27AP9-201ENST00000477681 438 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.78□□□□□ -1.96
ALFQ53S48 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 AC087854.1-201ENST00000519706 414 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.78□□□□□ -1.96
ALFQ53S48 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.78□□□□□ -1.96
ALFQ53S48 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.78□□□□□ -1.96
ALFQ53S48 AC092807.2-201ENST00000609367 243 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 AL161423.1-201ENST00000613700 262 ntBASIC2.78□□□□□ -1.96
ALFQ53S48 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ALFQ53S48 AC062016.1-201ENST00000355719 319 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 RNU6-1141P-201ENST00000364520 107 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 RNU6-483P-201ENST00000384088 108 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 MIR9-1-201ENST00000385198 89 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.77□□□□□ -1.97
ALFQ53S48 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.77□□□□□ -1.97
ALFQ53S48 RNU6-1208P-201ENST00000459588 107 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.77□□□□□ -1.97
ALFQ53S48 SNORA4.4-201ENST00000515921 135 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 SNORA19.2-201ENST00000516013 114 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 SNORA9.3-201ENST00000516383 129 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 RNU6-323P-201ENST00000521915 107 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 AP000763.2-201ENST00000540641 163 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.77□□□□□ -1.97
ALFQ53S48 AL118558.2-201ENST00000556294 238 ntBASIC2.77□□□□□ -1.97
ALFQ53S48 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.77□□□□□ -1.97
ALFQ53S48 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.77□□□□□ -1.97
ALFQ53S48 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms