Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.87□□□□□ -2.27
SPCS3P61009 RPL30P12-201ENST00000474666 353 ntBASIC0.87□□□□□ -2.27
SPCS3P61009 RPS23P4-201ENST00000487908 423 ntBASIC0.87□□□□□ -2.27
SPCS3P61009 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.87□□□□□ -2.27
SPCS3P61009 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.87□□□□□ -2.27
SPCS3P61009 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.87□□□□□ -2.27
SPCS3P61009 RNA5SP490-201ENST00000517141 136 ntBASIC0.87□□□□□ -2.27
SPCS3P61009 AC091163.3-201ENST00000518269 1144 ntBASIC0.87□□□□□ -2.27
SPCS3P61009 CENPUP1-201ENST00000526649 1202 ntBASIC0.87□□□□□ -2.27
SPCS3P61009 AC009712.1-201ENST00000564938 316 ntBASIC0.87□□□□□ -2.27
SPCS3P61009 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.87□□□□□ -2.27
SPCS3P61009 AC112220.3-201ENST00000605502 502 ntBASIC0.87□□□□□ -2.27
SPCS3P61009 AC092140.2-201ENST00000618027 521 ntBASIC0.87□□□□□ -2.27
SPCS3P61009 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.87□□□□□ -2.27
SPCS3P61009 AC241585.2-209ENST00000638217 143 ntBASIC0.87□□□□□ -2.27
SPCS3P61009 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.87□□□□□ -2.27
SPCS3P61009 AC092104.1-201ENST00000497346 1441 ntBASIC0.87□□□□□ -2.27
SPCS3P61009 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SPCS3P61009 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SPCS3P61009 RNU1-22P-201ENST00000363334 158 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SPCS3P61009 MIR520A-201ENST00000384862 85 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 BTF3L4P1-201ENST00000413813 468 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 BTF3P4-201ENST00000418852 495 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 EBAG9P1-201ENST00000418955 543 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.86□□□□□ -2.27
SPCS3P61009 PGBD4P5-201ENST00000445958 426 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.86□□□□□ -2.27
SPCS3P61009 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.86□□□□□ -2.27
SPCS3P61009 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.86□□□□□ -2.27
SPCS3P61009 AC006026.2-201ENST00000457376 180 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 RNA5SP269-201ENST00000459032 137 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 MTND2P33-201ENST00000506452 1031 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 SNORA43.2-201ENST00000516652 128 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.86□□□□□ -2.27
SPCS3P61009 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.86□□□□□ -2.27
SPCS3P61009 HMGB1P33-201ENST00000563485 527 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.86□□□□□ -2.27
SPCS3P61009 AL391001.1-201ENST00000602747 715 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 AL136363.2-201ENST00000604173 851 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 AL353770.2-201ENST00000620024 78 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 MTND5P35-201ENST00000557537 1720 ntBASIC0.86□□□□□ -2.27
SPCS3P61009 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SPCS3P61009 RNU5E-6P-201ENST00000365574 115 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 RNU6-1065P-201ENST00000384513 106 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 MIR548B-201ENST00000385247 97 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SPCS3P61009 AC010095.1-201ENST00000443543 144 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.85□□□□□ -2.27
SPCS3P61009 FTH1P25-201ENST00000447665 469 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.85□□□□□ -2.27
SPCS3P61009 AC093852.1-201ENST00000503587 266 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.85□□□□□ -2.27
SPCS3P61009 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.85□□□□□ -2.27
SPCS3P61009 Y_RNA.687-201ENST00000516558 91 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 RNU6-1092P-201ENST00000516955 87 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.85□□□□□ -2.27
SPCS3P61009 AC091135.1-201ENST00000585943 307 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 AL353778.1-201ENST00000603149 408 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 BCRP9-201ENST00000605312 388 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SPCS3P61009 RMST_4.1-201ENST00000616886 107 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 MIR8065-201ENST00000620577 100 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 AC099654.5-201ENST00000636479 350 ntBASIC0.85□□□□□ -2.27
SPCS3P61009 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.84□□□□□ -2.27
SPCS3P61009 RNU6-511P-201ENST00000363496 107 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 RNY3P13-201ENST00000365542 102 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SPCS3P61009 RNU6-946P-201ENST00000383878 107 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 RNU6-769P-201ENST00000384407 104 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 AC069282.1-201ENST00000411911 526 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.84□□□□□ -2.27
SPCS3P61009 MTND1P30-201ENST00000441241 901 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.84□□□□□ -2.27
SPCS3P61009 RNU7-95P-201ENST00000459222 64 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.84□□□□□ -2.27
SPCS3P61009 AC114982.1-201ENST00000469402 321 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.84□□□□□ -2.27
SPCS3P61009 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.84□□□□□ -2.27
SPCS3P61009 AC112206.3-201ENST00000514578 389 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 SNORD116-28-201ENST00000516123 91 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 Y_RNA.689-201ENST00000516589 107 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 RNA5SP437-201ENST00000517249 129 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.84□□□□□ -2.27
SPCS3P61009 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.84□□□□□ -2.27
SPCS3P61009 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.84□□□□□ -2.27
SPCS3P61009 BNIP3P6-201ENST00000549284 499 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.84□□□□□ -2.27
SPCS3P61009 BNIP3P31-201ENST00000604515 566 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 AC090578.1-201ENST00000604955 591 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 AC009033.1-201ENST00000624279 431 ntBASIC0.84□□□□□ -2.27
SPCS3P61009 AC245060.5-201ENST00000610778 3293 ntBASIC0.84□□□□□ -2.28
SPCS3P61009 SNORA63.3-201ENST00000362682 132 ntBASIC0.83□□□□□ -2.28
SPCS3P61009 SNORD56.1-201ENST00000362913 68 ntBASIC0.83□□□□□ -2.28
SPCS3P61009 RNU1-124P-201ENST00000363861 145 ntBASIC0.83□□□□□ -2.28
SPCS3P61009 SNORD32B-201ENST00000364460 84 ntBASIC0.83□□□□□ -2.28
SPCS3P61009 RNU4-62P-201ENST00000410125 130 ntBASIC0.83□□□□□ -2.28
SPCS3P61009 RNU2-62P-201ENST00000410868 191 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms