Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.24□□□□□ -1.89
CLRN1P58418 RNU6-1271P-201ENST00000517049 105 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RNU6-897P-201ENST00000517135 105 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AC091144.1-201ENST00000519573 138 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.24□□□□□ -1.89
CLRN1P58418 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.24□□□□□ -1.89
CLRN1P58418 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.24□□□□□ -1.89
CLRN1P58418 AC125232.2-201ENST00000592457 143 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.24□□□□□ -1.89
CLRN1P58418 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLRN1P58418 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.24□□□□□ -1.89
CLRN1P58418 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLRN1P58418 PWAR6-201ENST00000552334 4618 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 Y_RNA.27-201ENST00000362540 103 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 RNU1-76P-201ENST00000362903 159 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 MTHFD2P2-201ENST00000407725 247 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 MIR1193-201ENST00000408109 78 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 AC023141.4-201ENST00000412031 328 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.23□□□□□ -1.89
CLRN1P58418 RPEP5-201ENST00000441137 268 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.23□□□□□ -1.89
CLRN1P58418 AC012308.1-201ENST00000451232 178 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 SNRPGP3-201ENST00000469405 227 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 AP001025.1-201ENST00000486139 332 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 AF186996.7-201ENST00000492781 209 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 ANXA2P1-201ENST00000505539 926 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 SNORA40.15-201ENST00000516884 107 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 ACA59.2-201ENST00000517061 156 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 AC034114.1-201ENST00000520293 285 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 IGHV3-76-201ENST00000522465 295 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.23□□□□□ -1.89
CLRN1P58418 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.23□□□□□ -1.89
CLRN1P58418 AL442163.3-201ENST00000554110 156 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.23□□□□□ -1.89
CLRN1P58418 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.23□□□□□ -1.89
CLRN1P58418 AC068831.7-201ENST00000616954 363 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 AF127577.6-201ENST00000623352 2191 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.23□□□□□ -1.89
CLRN1P58418 SNORA43.4-201ENST00000629559 138 ntBASIC3.23□□□□□ -1.89
CLRN1P58418 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLRN1P58418 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLRN1P58418 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLRN1P58418 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CLRN1P58418 RNU6-222P-201ENST00000362438 107 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 Y_RNA.19-201ENST00000362462 99 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 RNU6-770P-201ENST00000363929 105 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.22□□□□□ -1.89
CLRN1P58418 SNORA29-201ENST00000384183 140 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 RNU6-843P-201ENST00000384454 104 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 Y_RNA.504-201ENST00000384481 104 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 SNORA57.1-201ENST00000391227 145 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.22□□□□□ -1.89
CLRN1P58418 AP000907.1-201ENST00000428428 510 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CLRN1P58418 AL161651.1-201ENST00000440882 223 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.22□□□□□ -1.89
CLRN1P58418 AC087477.1-201ENST00000465747 340 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 AC010469.2-201ENST00000496412 480 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 MTND4LP22-201ENST00000508209 276 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 AC026402.1-201ENST00000513642 170 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.22□□□□□ -1.89
CLRN1P58418 HSPE1P4-201ENST00000550617 308 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.22□□□□□ -1.89
CLRN1P58418 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.22□□□□□ -1.89
CLRN1P58418 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.22□□□□□ -1.89
CLRN1P58418 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.22□□□□□ -1.89
CLRN1P58418 AC078899.3-201ENST00000599065 212 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 AL356157.2-201ENST00000605122 111 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 AC062037.2-201ENST00000610137 73 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 MIR3529-201ENST00000637713 78 ntBASIC3.22□□□□□ -1.89
CLRN1P58418 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.22□□□□□ -1.89
CLRN1P58418 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.22□□□□□ -1.89
CLRN1P58418 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
CLRN1P58418 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CLRN1P58418 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CLRN1P58418 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLRN1P58418 RNU6-283P-201ENST00000364788 107 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 RNU6-142P-201ENST00000384019 107 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 RNU6-17P-201ENST00000384245 107 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 RNU6-198P-201ENST00000384258 104 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 Y_RNA.461-201ENST00000384263 103 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 RNU6-472P-201ENST00000384299 107 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 RNU6-18P-201ENST00000384527 107 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 MIR32-201ENST00000384965 70 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 AP000567.1-201ENST00000406413 156 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 RNA5SP38-201ENST00000410750 119 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 RNU6-130P-201ENST00000411112 103 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 AL356968.1-201ENST00000416622 474 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 SSXP4-201ENST00000451349 245 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 RN7SL283P-201ENST00000489055 303 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 RNU5F-8P-201ENST00000515941 111 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 HSPE1P20-201ENST00000538133 289 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLRN1P58418 AC090617.3-201ENST00000573670 475 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.21□□□□□ -1.9
CLRN1P58418 RNU1-30P-201ENST00000606575 163 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 AL391261.4-201ENST00000616012 481 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 AL138880.2-201ENST00000616214 239 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 AC091903.1-201ENST00000624322 454 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms