Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNA5SP390-201ENST00000410191 113 ntBASIC1.79□□□□□ -2.12
CDH4P55283 Y_RNA.598-201ENST00000410480 95 ntBASIC1.79□□□□□ -2.12
CDH4P55283 RNU2-48P-201ENST00000410694 191 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH4P55283 RPL21P90-201ENST00000415692 466 ntBASIC1.79□□□□□ -2.12
CDH4P55283 CYCSP46-201ENST00000423569 204 ntBASIC1.79□□□□□ -2.12
CDH4P55283 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH4P55283 AL645568.3-201ENST00000433683 316 ntBASIC1.79□□□□□ -2.12
CDH4P55283 MTND1P30-201ENST00000441241 901 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH4P55283 AL360271.2-201ENST00000447710 161 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.79□□□□□ -2.12
CDH4P55283 RPL30P12-201ENST00000474666 353 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH4P55283 RNU6-965P-201ENST00000516721 96 ntBASIC1.79□□□□□ -2.12
CDH4P55283 RNU6-1220P-201ENST00000517126 108 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AC022616.3-201ENST00000523940 148 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH4P55283 MIR3618-201ENST00000580330 88 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AC008521.1-201ENST00000587471 187 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH4P55283 AC091834.1-201ENST00000614543 472 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AL603839.4-201ENST00000624658 1005 ntBASIC1.79□□□□□ -2.12
CDH4P55283 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH4P55283 FARSBP1-201ENST00000435808 1778 ntBASIC1.78□□□□□ -2.12
CDH4P55283 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDH4P55283 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.78□□□□□ -2.12
CDH4P55283 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDH4P55283 snoU2_19.1-201ENST00000362361 80 ntBASIC1.78□□□□□ -2.12
CDH4P55283 RNU4-21P-201ENST00000362802 126 ntBASIC1.78□□□□□ -2.12
CDH4P55283 U8.3-201ENST00000363321 132 ntBASIC1.78□□□□□ -2.12
CDH4P55283 RNU6-944P-201ENST00000364023 107 ntBASIC1.78□□□□□ -2.12
CDH4P55283 RNU6-61P-201ENST00000365528 109 ntBASIC1.78□□□□□ -2.12
CDH4P55283 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.78□□□□□ -2.12
CDH4P55283 SNORA20.2-201ENST00000383922 131 ntBASIC1.78□□□□□ -2.12
CDH4P55283 RNU6-611P-201ENST00000384276 104 ntBASIC1.78□□□□□ -2.12
CDH4P55283 SNORD56-201ENST00000413522 71 ntBASIC1.78□□□□□ -2.12
CDH4P55283 AC244636.1-201ENST00000421152 228 ntBASIC1.78□□□□□ -2.12
CDH4P55283 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.78□□□□□ -2.12
CDH4P55283 PRELID3BP1-201ENST00000457142 540 ntBASIC1.78□□□□□ -2.12
CDH4P55283 snoU109.1-201ENST00000459339 135 ntBASIC1.78□□□□□ -2.12
CDH4P55283 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH4P55283 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH4P55283 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH4P55283 AC015712.3-201ENST00000559380 164 ntBASIC1.78□□□□□ -2.12
CDH4P55283 MIR4255-201ENST00000579351 72 ntBASIC1.78□□□□□ -2.12
CDH4P55283 MIR5692A1-201ENST00000580523 69 ntBASIC1.78□□□□□ -2.12
CDH4P55283 AC007792.1-201ENST00000623023 402 ntBASIC1.78□□□□□ -2.12
CDH4P55283 AC007494.3-201ENST00000624660 743 ntBASIC1.78□□□□□ -2.12
CDH4P55283 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDH4P55283 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDH4P55283 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDH4P55283 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDH4P55283 RNU6-179P-201ENST00000363350 107 ntBASIC1.77□□□□□ -2.13
CDH4P55283 RNU6-743P-201ENST00000364151 106 ntBASIC1.77□□□□□ -2.13
CDH4P55283 RNU6-234P-201ENST00000365229 104 ntBASIC1.77□□□□□ -2.13
CDH4P55283 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDH4P55283 MIR29C-201ENST00000385231 88 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AL627390.1-201ENST00000396055 340 ntBASIC1.77□□□□□ -2.13
CDH4P55283 RAP1BP3-201ENST00000407180 549 ntBASIC1.77□□□□□ -2.13
CDH4P55283 MIR1262-201ENST00000408276 93 ntBASIC1.77□□□□□ -2.13
CDH4P55283 RNU2-8P-201ENST00000410727 190 ntBASIC1.77□□□□□ -2.13
CDH4P55283 EEF1A1P40-201ENST00000412883 573 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH4P55283 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CDH4P55283 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.77□□□□□ -2.13
CDH4P55283 BX510359.4-201ENST00000423750 193 ntBASIC1.77□□□□□ -2.13
CDH4P55283 MTCYBP5-201ENST00000423752 1135 ntBASIC1.77□□□□□ -2.13
CDH4P55283 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH4P55283 AC104850.1-201ENST00000435940 476 ntBASIC1.77□□□□□ -2.13
CDH4P55283 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.77□□□□□ -2.13
CDH4P55283 AC245102.2-201ENST00000448956 180 ntBASIC1.77□□□□□ -2.13
CDH4P55283 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH4P55283 AL353752.1-201ENST00000454946 260 ntBASIC1.77□□□□□ -2.13
CDH4P55283 HMGN2P23-201ENST00000456759 269 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AC108210.2-201ENST00000503681 201 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.77□□□□□ -2.13
CDH4P55283 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.77□□□□□ -2.13
CDH4P55283 RNU1-86P-201ENST00000516108 154 ntBASIC1.77□□□□□ -2.13
CDH4P55283 SNORA25.15-201ENST00000516487 89 ntBASIC1.77□□□□□ -2.13
CDH4P55283 RNU1-107P-201ENST00000516617 154 ntBASIC1.77□□□□□ -2.13
CDH4P55283 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.77□□□□□ -2.13
CDH4P55283 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.77□□□□□ -2.13
CDH4P55283 AP005660.1-201ENST00000522972 293 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AP005639.2-201ENST00000527592 928 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.77□□□□□ -2.13
CDH4P55283 AC022616.8-201ENST00000533569 253 ntBASIC1.77□□□□□ -2.13
CDH4P55283 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.77□□□□□ -2.13
CDH4P55283 MIR3683-201ENST00000580847 82 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AC078795.2-201ENST00000602835 1252 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AC063944.3-201ENST00000609969 533 ntBASIC1.77□□□□□ -2.13
CDH4P55283 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AL359314.1-201ENST00000616913 261 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AC108479.2-201ENST00000617314 601 ntBASIC1.77□□□□□ -2.13
CDH4P55283 AL359740.1-201ENST00000624340 592 ntBASIC1.77□□□□□ -2.13
CDH4P55283 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.76□□□□□ -2.13
CDH4P55283 RNU6-371P-201ENST00000364283 108 ntBASIC1.76□□□□□ -2.13
CDH4P55283 RNU6-169P-201ENST00000365336 107 ntBASIC1.76□□□□□ -2.13
CDH4P55283 MIR29B2-201ENST00000385055 81 ntBASIC1.76□□□□□ -2.13
CDH4P55283 RNU11-3P-201ENST00000391111 133 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms