Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 BTF3L4P1-201ENST00000413813 468 ntBASIC2.26□□□□□ -2.05
VCPP55072 AL365338.1-201ENST00000422282 858 ntBASIC2.26□□□□□ -2.05
VCPP55072 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.26□□□□□ -2.05
VCPP55072 NDUFB1P2-201ENST00000449477 176 ntBASIC2.26□□□□□ -2.05
VCPP55072 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.26□□□□□ -2.05
VCPP55072 AL162395.1-201ENST00000457882 422 ntBASIC2.26□□□□□ -2.05
VCPP55072 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.26□□□□□ -2.05
VCPP55072 AC005840.1-201ENST00000498412 377 ntBASIC2.26□□□□□ -2.05
VCPP55072 RNA5SP112-201ENST00000515937 99 ntBASIC2.26□□□□□ -2.05
VCPP55072 AC092325.1-201ENST00000566449 554 ntBASIC2.26□□□□□ -2.05
VCPP55072 AC025449.1-201ENST00000603896 529 ntBASIC2.26□□□□□ -2.05
VCPP55072 AC087045.1-201ENST00000605856 382 ntBASIC2.26□□□□□ -2.05
VCPP55072 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.26□□□□□ -2.05
VCPP55072 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.26□□□□□ -2.05
VCPP55072 AP000553.5-201ENST00000641933 54 ntBASIC2.26□□□□□ -2.05
VCPP55072 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VCPP55072 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
VCPP55072 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.25□□□□□ -2.05
VCPP55072 RNU6-1029P-201ENST00000384109 107 ntBASIC2.25□□□□□ -2.05
VCPP55072 RNU1-148P-201ENST00000384472 162 ntBASIC2.25□□□□□ -2.05
VCPP55072 Y_RNA.582-201ENST00000391023 95 ntBASIC2.25□□□□□ -2.05
VCPP55072 RNU6-550P-201ENST00000391057 101 ntBASIC2.25□□□□□ -2.05
VCPP55072 SNORA48.3-201ENST00000391081 134 ntBASIC2.25□□□□□ -2.05
VCPP55072 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VCPP55072 RNU2-9P-201ENST00000410194 145 ntBASIC2.25□□□□□ -2.05
VCPP55072 RNA5SP270-201ENST00000411361 118 ntBASIC2.25□□□□□ -2.05
VCPP55072 RPL21P90-201ENST00000415692 466 ntBASIC2.25□□□□□ -2.05
VCPP55072 AC016831.2-201ENST00000417179 352 ntBASIC2.25□□□□□ -2.05
VCPP55072 MTATP6P18-201ENST00000417994 673 ntBASIC2.25□□□□□ -2.05
VCPP55072 AL627311.1-201ENST00000431514 115 ntBASIC2.25□□□□□ -2.05
VCPP55072 AC000111.3-201ENST00000433478 193 ntBASIC2.25□□□□□ -2.05
VCPP55072 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VCPP55072 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.25□□□□□ -2.05
VCPP55072 GPM6BP3-201ENST00000442797 145 ntBASIC2.25□□□□□ -2.05
VCPP55072 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.25□□□□□ -2.05
VCPP55072 AL360271.2-201ENST00000447710 161 ntBASIC2.25□□□□□ -2.05
VCPP55072 PSPHP1-201ENST00000450062 261 ntBASIC2.25□□□□□ -2.05
VCPP55072 RPS29P15-201ENST00000458329 171 ntBASIC2.25□□□□□ -2.05
VCPP55072 snoU13.18-201ENST00000459483 104 ntBASIC2.25□□□□□ -2.05
VCPP55072 AP001324.2-201ENST00000461163 319 ntBASIC2.25□□□□□ -2.05
VCPP55072 AC006512.1-201ENST00000468816 291 ntBASIC2.25□□□□□ -2.05
VCPP55072 RPS3AP17-201ENST00000472594 777 ntBASIC2.25□□□□□ -2.05
VCPP55072 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
VCPP55072 AC010493.1-201ENST00000513479 292 ntBASIC2.25□□□□□ -2.05
VCPP55072 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
VCPP55072 RNA5SP503-201ENST00000517047 117 ntBASIC2.25□□□□□ -2.05
VCPP55072 ACA59.2-201ENST00000517061 156 ntBASIC2.25□□□□□ -2.05
VCPP55072 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.25□□□□□ -2.05
VCPP55072 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.25□□□□□ -2.05
VCPP55072 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VCPP55072 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.25□□□□□ -2.05
VCPP55072 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.25□□□□□ -2.05
VCPP55072 AC025678.1-201ENST00000567861 338 ntBASIC2.25□□□□□ -2.05
VCPP55072 MTND1P15-201ENST00000579262 949 ntBASIC2.25□□□□□ -2.05
VCPP55072 LRRC37A5P-203ENST00000580181 585 ntBASIC2.25□□□□□ -2.05
VCPP55072 MIR5692A1-201ENST00000580523 69 ntBASIC2.25□□□□□ -2.05
VCPP55072 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.25□□□□□ -2.05
VCPP55072 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
VCPP55072 AC080013.6-201ENST00000606185 215 ntBASIC2.25□□□□□ -2.05
VCPP55072 AC092656.1-203ENST00000624134 423 ntBASIC2.25□□□□□ -2.05
VCPP55072 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VCPP55072 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.25□□□□□ -2.05
VCPP55072 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VCPP55072 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VCPP55072 WWP1P1-201ENST00000466609 2769 ntBASIC2.25□□□□□ -2.05
VCPP55072 AL109809.4-201ENST00000603520 2185 ntBASIC2.25□□□□□ -2.05
VCPP55072 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.24□□□□□ -2.05
VCPP55072 RNU6-1120P-201ENST00000362988 108 ntBASIC2.24□□□□□ -2.05
VCPP55072 Y_RNA.159-201ENST00000363674 87 ntBASIC2.24□□□□□ -2.05
VCPP55072 RNU5A-6P-201ENST00000384136 116 ntBASIC2.24□□□□□ -2.05
VCPP55072 RNU6-1103P-201ENST00000384150 107 ntBASIC2.24□□□□□ -2.05
VCPP55072 RNU6-606P-201ENST00000384721 111 ntBASIC2.24□□□□□ -2.05
VCPP55072 MIR583-201ENST00000384846 75 ntBASIC2.24□□□□□ -2.05
VCPP55072 AL356379.1-201ENST00000414105 126 ntBASIC2.24□□□□□ -2.05
VCPP55072 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.24□□□□□ -2.05
VCPP55072 AL596276.1-201ENST00000434465 418 ntBASIC2.24□□□□□ -2.05
VCPP55072 AC004383.1-201ENST00000438135 289 ntBASIC2.24□□□□□ -2.05
VCPP55072 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.24□□□□□ -2.05
VCPP55072 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.24□□□□□ -2.05
VCPP55072 AC079382.1-201ENST00000493346 557 ntBASIC2.24□□□□□ -2.05
VCPP55072 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.24□□□□□ -2.05
VCPP55072 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.24□□□□□ -2.05
VCPP55072 AC105313.1-201ENST00000509121 353 ntBASIC2.24□□□□□ -2.05
VCPP55072 AF213884.2-201ENST00000510417 903 ntBASIC2.24□□□□□ -2.05
VCPP55072 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.24□□□□□ -2.05
VCPP55072 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.24□□□□□ -2.05
VCPP55072 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.24□□□□□ -2.05
VCPP55072 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.24□□□□□ -2.05
VCPP55072 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
VCPP55072 ZNF680P1-201ENST00000436625 1469 ntBASIC2.23□□□□□ -2.05
VCPP55072 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
VCPP55072 SNORD14B-201ENST00000364533 90 ntBASIC2.23□□□□□ -2.05
VCPP55072 Y_RNA.296-201ENST00000364930 108 ntBASIC2.23□□□□□ -2.05
VCPP55072 RNU6-1042P-201ENST00000384204 107 ntBASIC2.23□□□□□ -2.05
VCPP55072 RNU6-748P-201ENST00000384648 107 ntBASIC2.23□□□□□ -2.05
VCPP55072 MIR10A-201ENST00000385043 110 ntBASIC2.23□□□□□ -2.05
VCPP55072 AL663109.1-201ENST00000411498 844 ntBASIC2.23□□□□□ -2.05
VCPP55072 AC073464.1-201ENST00000429823 534 ntBASIC2.23□□□□□ -2.05
VCPP55072 MTND1P18-201ENST00000448191 573 ntBASIC2.23□□□□□ -2.05
VCPP55072 AL118520.1-201ENST00000450770 291 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms