Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MIR4421-201ENST00000578133 69 ntBASIC1.74□□□□□ -2.13
ACLYP53396 AC008751.2-201ENST00000597885 980 ntBASIC1.74□□□□□ -2.13
ACLYP53396 RMST_6.1-201ENST00000611980 203 ntBASIC1.74□□□□□ -2.13
ACLYP53396 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
ACLYP53396 ZNF209P-201ENST00000593450 2304 ntBASIC1.74□□□□□ -2.13
ACLYP53396 MIR578-201ENST00000384828 96 ntBASIC1.73□□□□□ -2.13
ACLYP53396 MIR29C-201ENST00000385231 88 ntBASIC1.73□□□□□ -2.13
ACLYP53396 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ACLYP53396 RNU2-32P-201ENST00000411193 191 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AL031779.1-201ENST00000415663 330 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AC114491.1-201ENST00000416095 246 ntBASIC1.73□□□□□ -2.13
ACLYP53396 ELOCP4-201ENST00000420090 333 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AC244636.1-201ENST00000421152 228 ntBASIC1.73□□□□□ -2.13
ACLYP53396 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.73□□□□□ -2.13
ACLYP53396 MTND2P29-201ENST00000438595 412 ntBASIC1.73□□□□□ -2.13
ACLYP53396 MTND5P2-201ENST00000442927 1142 ntBASIC1.73□□□□□ -2.13
ACLYP53396 RPL23AP6-201ENST00000446637 472 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.73□□□□□ -2.13
ACLYP53396 snoU13.18-201ENST00000459483 104 ntBASIC1.73□□□□□ -2.13
ACLYP53396 RNU1-92P-201ENST00000517017 135 ntBASIC1.73□□□□□ -2.13
ACLYP53396 MTND2P32-201ENST00000521584 1038 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.73□□□□□ -2.13
ACLYP53396 CLIC4P2-201ENST00000601934 717 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AL353778.1-201ENST00000603149 408 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AL078605.1-201ENST00000603529 500 ntBASIC1.73□□□□□ -2.13
ACLYP53396 Z82243.1-201ENST00000609432 473 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AC138749.5-201ENST00000611461 208 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AL773524.1-201ENST00000614065 229 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AC005296.1-201ENST00000616145 209 ntBASIC1.73□□□□□ -2.13
ACLYP53396 AC116165.2-201ENST00000616705 206 ntBASIC1.73□□□□□ -2.13
ACLYP53396 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ACLYP53396 FARSBP1-201ENST00000435808 1778 ntBASIC1.72□□□□□ -2.13
ACLYP53396 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
ACLYP53396 SNORD115-3-201ENST00000363100 82 ntBASIC1.72□□□□□ -2.13
ACLYP53396 RNU4-13P-201ENST00000364019 141 ntBASIC1.72□□□□□ -2.13
ACLYP53396 RNU4-28P-201ENST00000364739 141 ntBASIC1.72□□□□□ -2.13
ACLYP53396 RNU6-384P-201ENST00000364900 104 ntBASIC1.72□□□□□ -2.13
ACLYP53396 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
ACLYP53396 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.72□□□□□ -2.13
ACLYP53396 RNU6-546P-201ENST00000383991 107 ntBASIC1.72□□□□□ -2.13
ACLYP53396 RNU6-611P-201ENST00000384276 104 ntBASIC1.72□□□□□ -2.13
ACLYP53396 MIR558-201ENST00000384920 94 ntBASIC1.72□□□□□ -2.13
ACLYP53396 MTCYBP36-201ENST00000404146 440 ntBASIC1.72□□□□□ -2.13
ACLYP53396 RNU2-39P-201ENST00000410604 198 ntBASIC1.72□□□□□ -2.13
ACLYP53396 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.72□□□□□ -2.13
ACLYP53396 MED13P1-201ENST00000428342 171 ntBASIC1.72□□□□□ -2.13
ACLYP53396 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.72□□□□□ -2.13
ACLYP53396 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.72□□□□□ -2.13
ACLYP53396 AL512286.1-201ENST00000439244 400 ntBASIC1.72□□□□□ -2.13
ACLYP53396 snoU13.14-201ENST00000459372 104 ntBASIC1.72□□□□□ -2.13
ACLYP53396 AC117522.1-201ENST00000509821 380 ntBASIC1.72□□□□□ -2.13
ACLYP53396 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.72□□□□□ -2.13
ACLYP53396 RN7SKP256-201ENST00000517201 314 ntBASIC1.72□□□□□ -2.13
ACLYP53396 SNORA31.24-201ENST00000517232 57 ntBASIC1.72□□□□□ -2.13
ACLYP53396 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.72□□□□□ -2.13
ACLYP53396 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
ACLYP53396 BNIP3P39-201ENST00000601077 554 ntBASIC1.72□□□□□ -2.13
ACLYP53396 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.72□□□□□ -2.13
ACLYP53396 AC093648.1-201ENST00000623546 606 ntBASIC1.72□□□□□ -2.13
ACLYP53396 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
ACLYP53396 AL157786.1-207ENST00000627771 695 ntBASIC1.72□□□□□ -2.13
ACLYP53396 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ACLYP53396 RNU6-212P-201ENST00000362642 104 ntBASIC1.71□□□□□ -2.14
ACLYP53396 RNU6-1214P-201ENST00000363650 109 ntBASIC1.71□□□□□ -2.14
ACLYP53396 RNU6-641P-201ENST00000384006 107 ntBASIC1.71□□□□□ -2.14
ACLYP53396 SNORA24.1-201ENST00000384401 135 ntBASIC1.71□□□□□ -2.14
ACLYP53396 SNORA8-201ENST00000384574 139 ntBASIC1.71□□□□□ -2.14
ACLYP53396 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
ACLYP53396 RNA5SP465-201ENST00000391195 109 ntBASIC1.71□□□□□ -2.14
ACLYP53396 CBX3P9-201ENST00000402326 552 ntBASIC1.71□□□□□ -2.14
ACLYP53396 MIR1283-2-201ENST00000408621 87 ntBASIC1.71□□□□□ -2.14
ACLYP53396 RNA5SP390-201ENST00000410191 113 ntBASIC1.71□□□□□ -2.14
ACLYP53396 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ACLYP53396 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.71□□□□□ -2.14
ACLYP53396 AL589872.1-201ENST00000426602 288 ntBASIC1.71□□□□□ -2.14
ACLYP53396 SNORA43.2-201ENST00000516652 128 ntBASIC1.71□□□□□ -2.14
ACLYP53396 RNU2-44P-201ENST00000516795 194 ntBASIC1.71□□□□□ -2.14
ACLYP53396 MRPS36P3-201ENST00000519284 130 ntBASIC1.71□□□□□ -2.14
ACLYP53396 AP005639.2-201ENST00000527592 928 ntBASIC1.71□□□□□ -2.14
ACLYP53396 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.71□□□□□ -2.14
ACLYP53396 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.71□□□□□ -2.14
ACLYP53396 WISP1-OT1-201ENST00000602893 642 ntBASIC1.71□□□□□ -2.14
ACLYP53396 AL157834.3-201ENST00000615543 103 ntBASIC1.71□□□□□ -2.14
ACLYP53396 MIR7844-201ENST00000616161 122 ntBASIC1.71□□□□□ -2.14
ACLYP53396 AL359314.1-201ENST00000616913 261 ntBASIC1.71□□□□□ -2.14
ACLYP53396 AC022960.3-201ENST00000619794 441 ntBASIC1.71□□□□□ -2.14
ACLYP53396 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.71□□□□□ -2.14
ACLYP53396 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.7□□□□□ -2.14
ACLYP53396 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ACLYP53396 RPS3AP36-201ENST00000398190 775 ntBASIC1.7□□□□□ -2.14
ACLYP53396 AL356432.1-201ENST00000405809 419 ntBASIC1.7□□□□□ -2.14
ACLYP53396 MIR1262-201ENST00000408276 93 ntBASIC1.7□□□□□ -2.14
ACLYP53396 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ACLYP53396 AC074117.2-201ENST00000417130 397 ntBASIC1.7□□□□□ -2.14
ACLYP53396 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.7□□□□□ -2.14
ACLYP53396 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.7□□□□□ -2.14
ACLYP53396 AL360271.2-201ENST00000447710 161 ntBASIC1.7□□□□□ -2.14
ACLYP53396 AC245102.2-201ENST00000448956 180 ntBASIC1.7□□□□□ -2.14
ACLYP53396 PRELID3BP1-201ENST00000457142 540 ntBASIC1.7□□□□□ -2.14
ACLYP53396 HMGN1P7-201ENST00000491722 313 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms