Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AC010620.2-201ENST00000600135 313 ntBASIC3.97□□□□□ -1.77
CDR1P51861 RNA5SP108-201ENST00000605921 117 ntBASIC3.97□□□□□ -1.77
CDR1P51861 MIR8058-201ENST00000615737 89 ntBASIC3.97□□□□□ -1.77
CDR1P51861 AL353748.2-201ENST00000622148 471 ntBASIC3.97□□□□□ -1.77
CDR1P51861 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.97□□□□□ -1.77
CDR1P51861 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDR1P51861 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CDR1P51861 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDR1P51861 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDR1P51861 AC007656.2-201ENST00000624902 4547 ntBASIC3.96□□□□□ -1.77
CDR1P51861 AF127577.6-201ENST00000623352 2191 ntBASIC3.96□□□□□ -1.78
CDR1P51861 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.96□□□□□ -1.78
CDR1P51861 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDR1P51861 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDR1P51861 RNU6-512P-201ENST00000364438 103 ntBASIC3.96□□□□□ -1.78
CDR1P51861 RNY3P4-201ENST00000384428 101 ntBASIC3.96□□□□□ -1.78
CDR1P51861 Y_RNA.541-201ENST00000384640 113 ntBASIC3.96□□□□□ -1.78
CDR1P51861 MIR199A2-201ENST00000385289 110 ntBASIC3.96□□□□□ -1.78
CDR1P51861 RNU6-837P-201ENST00000391056 108 ntBASIC3.96□□□□□ -1.78
CDR1P51861 MIR190B-201ENST00000401119 79 ntBASIC3.96□□□□□ -1.78
CDR1P51861 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.96□□□□□ -1.78
CDR1P51861 MTCO3P29-201ENST00000432119 779 ntBASIC3.96□□□□□ -1.78
CDR1P51861 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.96□□□□□ -1.78
CDR1P51861 RPL23AP22-201ENST00000437556 453 ntBASIC3.96□□□□□ -1.78
CDR1P51861 HIGD1AP2-201ENST00000446367 280 ntBASIC3.96□□□□□ -1.78
CDR1P51861 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDR1P51861 AC079354.2-201ENST00000453523 154 ntBASIC3.96□□□□□ -1.78
CDR1P51861 RN7SKP210-201ENST00000459176 261 ntBASIC3.96□□□□□ -1.78
CDR1P51861 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.96□□□□□ -1.78
CDR1P51861 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.96□□□□□ -1.78
CDR1P51861 RNU2-58P-201ENST00000516403 183 ntBASIC3.96□□□□□ -1.78
CDR1P51861 SNORA25.14-201ENST00000516481 132 ntBASIC3.96□□□□□ -1.78
CDR1P51861 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.96□□□□□ -1.78
CDR1P51861 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.96□□□□□ -1.78
CDR1P51861 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.96□□□□□ -1.78
CDR1P51861 AP002770.2-201ENST00000543613 532 ntBASIC3.96□□□□□ -1.78
CDR1P51861 MIR4643-201ENST00000577473 78 ntBASIC3.96□□□□□ -1.78
CDR1P51861 SNORA51-201ENST00000606420 132 ntBASIC3.96□□□□□ -1.78
CDR1P51861 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.96□□□□□ -1.78
CDR1P51861 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.96□□□□□ -1.78
CDR1P51861 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.96□□□□□ -1.78
CDR1P51861 AL133383.2-201ENST00000622958 2336 ntBASIC3.96□□□□□ -1.78
CDR1P51861 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDR1P51861 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDR1P51861 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDR1P51861 Y_RNA.199-201ENST00000364014 102 ntBASIC3.95□□□□□ -1.78
CDR1P51861 Y_RNA.358-201ENST00000365491 99 ntBASIC3.95□□□□□ -1.78
CDR1P51861 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.95□□□□□ -1.78
CDR1P51861 AL592148.1-201ENST00000413568 445 ntBASIC3.95□□□□□ -1.78
CDR1P51861 RPS29P4-201ENST00000414733 161 ntBASIC3.95□□□□□ -1.78
CDR1P51861 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.95□□□□□ -1.78
CDR1P51861 AL117339.3-201ENST00000418733 162 ntBASIC3.95□□□□□ -1.78
CDR1P51861 TMEM167AP1-201ENST00000423409 219 ntBASIC3.95□□□□□ -1.78
CDR1P51861 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.95□□□□□ -1.78
CDR1P51861 AC026403.1-201ENST00000518938 295 ntBASIC3.95□□□□□ -1.78
CDR1P51861 AC010186.2-204ENST00000537668 439 ntBASIC3.95□□□□□ -1.78
CDR1P51861 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.95□□□□□ -1.78
CDR1P51861 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.95□□□□□ -1.78
CDR1P51861 AL161756.2-201ENST00000604597 246 ntBASIC3.95□□□□□ -1.78
CDR1P51861 RNU1-30P-201ENST00000606575 163 ntBASIC3.95□□□□□ -1.78
CDR1P51861 U2.14-201ENST00000615943 113 ntBASIC3.95□□□□□ -1.78
CDR1P51861 AC012314.7-201ENST00000619693 93 ntBASIC3.95□□□□□ -1.78
CDR1P51861 AC009812.4-201ENST00000569134 1805 ntBASIC3.95□□□□□ -1.78
CDR1P51861 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDR1P51861 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.95□□□□□ -1.78
CDR1P51861 MIR412-201ENST00000362142 91 ntBASIC3.94□□□□□ -1.78
CDR1P51861 MIR411-201ENST00000362239 96 ntBASIC3.94□□□□□ -1.78
CDR1P51861 Y_RNA.143-201ENST00000363520 106 ntBASIC3.94□□□□□ -1.78
CDR1P51861 U3.6-201ENST00000363622 211 ntBASIC3.94□□□□□ -1.78
CDR1P51861 RNA5SP240-201ENST00000365355 128 ntBASIC3.94□□□□□ -1.78
CDR1P51861 MIR490-201ENST00000384865 128 ntBASIC3.94□□□□□ -1.78
CDR1P51861 MIR7-3-201ENST00000384898 110 ntBASIC3.94□□□□□ -1.78
CDR1P51861 SNORA12.2-201ENST00000391040 156 ntBASIC3.94□□□□□ -1.78
CDR1P51861 RNU6-1140P-201ENST00000410517 106 ntBASIC3.94□□□□□ -1.78
CDR1P51861 RNU6-1025P-201ENST00000410629 104 ntBASIC3.94□□□□□ -1.78
CDR1P51861 AC098831.1-201ENST00000440661 216 ntBASIC3.94□□□□□ -1.78
CDR1P51861 HSPE1P6-201ENST00000479457 291 ntBASIC3.94□□□□□ -1.78
CDR1P51861 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.94□□□□□ -1.78
CDR1P51861 AC107393.1-201ENST00000512403 346 ntBASIC3.94□□□□□ -1.78
CDR1P51861 SERF1AP1-201ENST00000514575 187 ntBASIC3.94□□□□□ -1.78
CDR1P51861 Y_RNA.683-201ENST00000516508 93 ntBASIC3.94□□□□□ -1.78
CDR1P51861 SCARNA24.2-201ENST00000516968 130 ntBASIC3.94□□□□□ -1.78
CDR1P51861 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDR1P51861 AP002392.1-201ENST00000537692 208 ntBASIC3.94□□□□□ -1.78
CDR1P51861 AC104581.2-201ENST00000572227 430 ntBASIC3.94□□□□□ -1.78
CDR1P51861 Y_RNA.772-201ENST00000606692 102 ntBASIC3.94□□□□□ -1.78
CDR1P51861 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDR1P51861 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDR1P51861 AL161912.2-201ENST00000565707 3007 ntBASIC3.94□□□□□ -1.78
CDR1P51861 AC091152.2-201ENST00000591628 2569 ntBASIC3.94□□□□□ -1.78
CDR1P51861 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.93□□□□□ -1.78
CDR1P51861 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDR1P51861 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDR1P51861 RNU5A-1-201ENST00000362698 116 ntBASIC3.93□□□□□ -1.78
CDR1P51861 RNA5SP119-201ENST00000362715 117 ntBASIC3.93□□□□□ -1.78
CDR1P51861 RNU6-1167P-201ENST00000363227 94 ntBASIC3.93□□□□□ -1.78
CDR1P51861 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.93□□□□□ -1.78
CDR1P51861 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.93□□□□□ -1.78
CDR1P51861 AL158156.1-201ENST00000422509 473 ntBASIC3.93□□□□□ -1.78
CDR1P51861 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms