Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCN3P51790 TOMM20P4-201ENST00000427861 435 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCN3P51790 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCN3P51790 AC011816.1-201ENST00000441346 546 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 EEF1B2P7-201ENST00000451177 676 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 RPS29P12-201ENST00000460178 152 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 RPL7P43-201ENST00000478876 753 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 AC006483.1-201ENST00000487308 313 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCN3P51790 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCN3P51790 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCN3P51790 RAC1P5-201ENST00000512182 576 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 RNU6-1069P-201ENST00000516612 133 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 RNU6-1088P-201ENST00000516850 104 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 CYCSP27-201ENST00000527643 293 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCN3P51790 RPL23AP78-201ENST00000599928 470 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 AC092747.3-201ENST00000603769 301 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCN3P51790 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CLCN3P51790 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLCN3P51790 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CLCN3P51790 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLCN3P51790 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CLCN3P51790 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CLCN3P51790 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCN3P51790 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.95
CLCN3P51790 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CLCN3P51790 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.84□□□□□ -1.95
CLCN3P51790 AC004944.1-201ENST00000517807 3059 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 SNORD113-7-201ENST00000363762 77 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 Y_RNA.373-201ENST00000365600 103 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 RNU6-898P-201ENST00000365627 104 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 RNU6-72P-201ENST00000384285 79 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCN3P51790 RNU2-49P-201ENST00000410666 184 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 RPS20P15-201ENST00000412792 311 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AC009414.1-201ENST00000427200 443 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AL161651.1-201ENST00000440882 223 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.84□□□□□ -1.95
CLCN3P51790 AC233279.1-201ENST00000455300 423 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AC006026.2-201ENST00000457376 180 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 RN7SL429P-201ENST00000479090 223 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AC103975.1-201ENST00000482506 483 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 RN7SL489P-201ENST00000486185 223 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 RN7SL327P-201ENST00000488659 223 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.84□□□□□ -1.95
CLCN3P51790 AP004607.1-201ENST00000524456 203 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AL121821.2-201ENST00000556081 394 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.84□□□□□ -1.95
CLCN3P51790 AL355375.2-201ENST00000574825 175 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.84□□□□□ -1.95
CLCN3P51790 MIR3672-201ENST00000584290 82 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 POLR3GP2-201ENST00000588366 668 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AL391813.1-201ENST00000603098 260 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AL670379.10-201ENST00000604330 253 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AL670379.9-201ENST00000605428 253 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 AL050343.2-201ENST00000607338 280 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 RN7SL853P-201ENST00000617250 223 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCN3P51790 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.84□□□□□ -1.95
CLCN3P51790 AC099654.10-201ENST00000640395 161 ntBASIC2.84□□□□□ -1.95
CLCN3P51790 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.84□□□□□ -1.95
CLCN3P51790 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
CLCN3P51790 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CLCN3P51790 Y_RNA.324-201ENST00000365165 102 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 RNU1-100P-201ENST00000365255 165 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 MIR548K-201ENST00000408406 116 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.83□□□□□ -1.96
CLCN3P51790 OSTCP8-201ENST00000445117 448 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 HIGD1AP2-201ENST00000446367 280 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.83□□□□□ -1.96
CLCN3P51790 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.83□□□□□ -1.96
CLCN3P51790 AC087884.1-201ENST00000469738 328 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 MTCO1P29-201ENST00000496868 288 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 TRBVA-201ENST00000498804 316 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 SNORA14.1-201ENST00000516113 141 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 SNORA25.17-201ENST00000517184 124 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 AC069113.1-201ENST00000517763 267 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.83□□□□□ -1.96
CLCN3P51790 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.83□□□□□ -1.96
CLCN3P51790 MIR4435-1-201ENST00000582552 80 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 AC023043.2-201ENST00000589678 1026 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 AC044792.1-201ENST00000593294 196 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 AL355877.2-201ENST00000603670 358 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 AC113139.1-201ENST00000605049 239 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 AL353621.2-201ENST00000605340 133 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.83□□□□□ -1.96
CLCN3P51790 MIR1302-1-201ENST00000637932 143 ntBASIC2.83□□□□□ -1.96
CLCN3P51790 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.83□□□□□ -1.96
CLCN3P51790 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
CLCN3P51790 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.83□□□□□ -1.96
CLCN3P51790 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLCN3P51790 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.82□□□□□ -1.96
CLCN3P51790 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLCN3P51790 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 RNU6-1280P-201ENST00000365211 107 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms