Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 MIR558-201ENST00000384920 94 ntBASIC1.42□□□□□ -2.18
ERFP50548 SNORD115.1-201ENST00000391109 76 ntBASIC1.42□□□□□ -2.18
ERFP50548 Y_RNA.597-201ENST00000410463 100 ntBASIC1.42□□□□□ -2.18
ERFP50548 RNU2-23P-201ENST00000410545 195 ntBASIC1.42□□□□□ -2.18
ERFP50548 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.42□□□□□ -2.18
ERFP50548 AL591806.2-201ENST00000433122 173 ntBASIC1.42□□□□□ -2.18
ERFP50548 MTATP6P16-201ENST00000434543 526 ntBASIC1.42□□□□□ -2.18
ERFP50548 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.42□□□□□ -2.18
ERFP50548 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.42□□□□□ -2.18
ERFP50548 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.42□□□□□ -2.18
ERFP50548 AL357134.1-201ENST00000445848 426 ntBASIC1.42□□□□□ -2.18
ERFP50548 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.42□□□□□ -2.18
ERFP50548 RAP1BP2-201ENST00000478270 544 ntBASIC1.42□□□□□ -2.18
ERFP50548 AC117522.1-201ENST00000509821 380 ntBASIC1.42□□□□□ -2.18
ERFP50548 PTP4A1P4-201ENST00000512479 322 ntBASIC1.42□□□□□ -2.18
ERFP50548 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.42□□□□□ -2.18
ERFP50548 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
ERFP50548 SNORA25.15-201ENST00000516487 89 ntBASIC1.42□□□□□ -2.18
ERFP50548 SNORA44.1-201ENST00000517031 108 ntBASIC1.42□□□□□ -2.18
ERFP50548 MTND2P32-201ENST00000521584 1038 ntBASIC1.42□□□□□ -2.18
ERFP50548 AP005435.4-201ENST00000529514 284 ntBASIC1.42□□□□□ -2.18
ERFP50548 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.42□□□□□ -2.18
ERFP50548 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.42□□□□□ -2.18
ERFP50548 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.42□□□□□ -2.18
ERFP50548 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.42□□□□□ -2.18
ERFP50548 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.42□□□□□ -2.18
ERFP50548 BNIP3P25-201ENST00000596023 559 ntBASIC1.42□□□□□ -2.18
ERFP50548 AC008751.2-201ENST00000597885 980 ntBASIC1.42□□□□□ -2.18
ERFP50548 AC112191.3-201ENST00000604371 277 ntBASIC1.42□□□□□ -2.18
ERFP50548 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.42□□□□□ -2.18
ERFP50548 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
ERFP50548 AL132822.1-201ENST00000617063 513 ntBASIC1.42□□□□□ -2.18
ERFP50548 AC009159.2-201ENST00000617603 606 ntBASIC1.42□□□□□ -2.18
ERFP50548 MIR1248-201ENST00000629190 106 ntBASIC1.42□□□□□ -2.18
ERFP50548 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
ERFP50548 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ERFP50548 OR4G2P-201ENST00000328113 903 ntBASIC1.41□□□□□ -2.18
ERFP50548 RNU6-500P-201ENST00000362349 107 ntBASIC1.41□□□□□ -2.18
ERFP50548 RNU6-78P-201ENST00000362897 107 ntBASIC1.41□□□□□ -2.18
ERFP50548 RNU6-1164P-201ENST00000364428 107 ntBASIC1.41□□□□□ -2.18
ERFP50548 SNORA12-201ENST00000391162 147 ntBASIC1.41□□□□□ -2.18
ERFP50548 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
ERFP50548 RNA5SP501-201ENST00000410990 112 ntBASIC1.41□□□□□ -2.18
ERFP50548 MTCYBP5-201ENST00000423752 1135 ntBASIC1.41□□□□□ -2.18
ERFP50548 MTCO3P5-201ENST00000433620 714 ntBASIC1.41□□□□□ -2.18
ERFP50548 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.41□□□□□ -2.18
ERFP50548 MTND5P2-201ENST00000442927 1142 ntBASIC1.41□□□□□ -2.18
ERFP50548 SNORD13-201ENST00000459299 104 ntBASIC1.41□□□□□ -2.18
ERFP50548 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.41□□□□□ -2.18
ERFP50548 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.41□□□□□ -2.18
ERFP50548 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.41□□□□□ -2.18
ERFP50548 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.41□□□□□ -2.18
ERFP50548 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.41□□□□□ -2.18
ERFP50548 AC009646.1-201ENST00000510455 318 ntBASIC1.41□□□□□ -2.18
ERFP50548 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.41□□□□□ -2.18
ERFP50548 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
ERFP50548 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.41□□□□□ -2.18
ERFP50548 CR383656.8-201ENST00000549046 145 ntBASIC1.41□□□□□ -2.18
ERFP50548 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.41□□□□□ -2.18
ERFP50548 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.41□□□□□ -2.18
ERFP50548 AL353778.1-201ENST00000603149 408 ntBASIC1.41□□□□□ -2.18
ERFP50548 AL359999.1-201ENST00000604513 294 ntBASIC1.41□□□□□ -2.18
ERFP50548 BX248123.2-201ENST00000606318 124 ntBASIC1.41□□□□□ -2.18
ERFP50548 AC025754.2-201ENST00000606491 432 ntBASIC1.41□□□□□ -2.18
ERFP50548 AC006927.3-201ENST00000638789 384 ntBASIC1.41□□□□□ -2.18
ERFP50548 RNY4P34-201ENST00000364779 95 ntBASIC1.4□□□□□ -2.19
ERFP50548 RNU6-1303P-201ENST00000364841 107 ntBASIC1.4□□□□□ -2.19
ERFP50548 RNA5SP190-201ENST00000365222 118 ntBASIC1.4□□□□□ -2.19
ERFP50548 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
ERFP50548 SNORA20.2-201ENST00000383922 131 ntBASIC1.4□□□□□ -2.19
ERFP50548 RNU6-439P-201ENST00000384188 106 ntBASIC1.4□□□□□ -2.19
ERFP50548 Y_RNA.560-201ENST00000384689 102 ntBASIC1.4□□□□□ -2.19
ERFP50548 Y_RNA.576-201ENST00000384781 102 ntBASIC1.4□□□□□ -2.19
ERFP50548 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.4□□□□□ -2.19
ERFP50548 EIF4EP2-201ENST00000422816 654 ntBASIC1.4□□□□□ -2.19
ERFP50548 AL365400.1-201ENST00000431854 640 ntBASIC1.4□□□□□ -2.19
ERFP50548 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.4□□□□□ -2.19
ERFP50548 UBE2D3P4-201ENST00000441973 436 ntBASIC1.4□□□□□ -2.19
ERFP50548 Z73417.1-201ENST00000447373 778 ntBASIC1.4□□□□□ -2.19
ERFP50548 MTCYBP1-201ENST00000454315 1119 ntBASIC1.4□□□□□ -2.19
ERFP50548 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.4□□□□□ -2.19
ERFP50548 HMGN2P23-201ENST00000456759 269 ntBASIC1.4□□□□□ -2.19
ERFP50548 RPL30P6-201ENST00000475925 342 ntBASIC1.4□□□□□ -2.19
ERFP50548 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.4□□□□□ -2.19
ERFP50548 Y_RNA.672-201ENST00000516289 104 ntBASIC1.4□□□□□ -2.19
ERFP50548 SCARNA1-201ENST00000517138 166 ntBASIC1.4□□□□□ -2.19
ERFP50548 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.4□□□□□ -2.19
ERFP50548 AC022616.8-201ENST00000533569 253 ntBASIC1.4□□□□□ -2.19
ERFP50548 RPL21P5-201ENST00000554662 472 ntBASIC1.4□□□□□ -2.19
ERFP50548 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.4□□□□□ -2.19
ERFP50548 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.4□□□□□ -2.19
ERFP50548 AC138749.5-201ENST00000611461 208 ntBASIC1.4□□□□□ -2.19
ERFP50548 AC116165.2-201ENST00000616705 206 ntBASIC1.4□□□□□ -2.19
ERFP50548 AL359314.1-201ENST00000616913 261 ntBASIC1.4□□□□□ -2.19
ERFP50548 SCARNA4-202ENST00000625402 129 ntBASIC1.4□□□□□ -2.19
ERFP50548 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
ERFP50548 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
ERFP50548 FARSBP1-201ENST00000435808 1778 ntBASIC1.39□□□□□ -2.19
ERFP50548 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
ERFP50548 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms