Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU6-338P-201ENST00000383888 105 ntBASIC3.32□□□□□ -1.88
CLK3P49761 RNU6-1179P-201ENST00000384667 107 ntBASIC3.32□□□□□ -1.88
CLK3P49761 MIR325-201ENST00000385260 98 ntBASIC3.32□□□□□ -1.88
CLK3P49761 RNU6-700P-201ENST00000391043 107 ntBASIC3.32□□□□□ -1.88
CLK3P49761 RPL21P17-201ENST00000397467 475 ntBASIC3.32□□□□□ -1.88
CLK3P49761 Y_RNA.592-201ENST00000410274 109 ntBASIC3.32□□□□□ -1.88
CLK3P49761 RNU6-1203P-201ENST00000410703 110 ntBASIC3.32□□□□□ -1.88
CLK3P49761 RNU2-25P-201ENST00000411041 191 ntBASIC3.32□□□□□ -1.88
CLK3P49761 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.32□□□□□ -1.88
CLK3P49761 Z82210.1-201ENST00000440037 231 ntBASIC3.32□□□□□ -1.88
CLK3P49761 RPEP5-201ENST00000441137 268 ntBASIC3.32□□□□□ -1.88
CLK3P49761 RPL7P5-201ENST00000471472 736 ntBASIC3.32□□□□□ -1.88
CLK3P49761 APOOP4-201ENST00000513530 597 ntBASIC3.32□□□□□ -1.88
CLK3P49761 SNORA31.6-201ENST00000516241 130 ntBASIC3.32□□□□□ -1.88
CLK3P49761 RNU5B-3P-201ENST00000516601 115 ntBASIC3.32□□□□□ -1.88
CLK3P49761 MIR2276-201ENST00000516886 89 ntBASIC3.32□□□□□ -1.88
CLK3P49761 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLK3P49761 MIR5696-201ENST00000578474 85 ntBASIC3.32□□□□□ -1.88
CLK3P49761 AC098826.3-201ENST00000603823 466 ntBASIC3.32□□□□□ -1.88
CLK3P49761 AP000787.2-201ENST00000604432 568 ntBASIC3.32□□□□□ -1.88
CLK3P49761 AP001282.2-201ENST00000616149 309 ntBASIC3.32□□□□□ -1.88
CLK3P49761 AC002076.2-201ENST00000617362 122 ntBASIC3.32□□□□□ -1.88
CLK3P49761 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.32□□□□□ -1.88
CLK3P49761 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CLK3P49761 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLK3P49761 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLK3P49761 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLK3P49761 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLK3P49761 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLK3P49761 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.31□□□□□ -1.88
CLK3P49761 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.31□□□□□ -1.88
CLK3P49761 RPL9P7-201ENST00000330965 580 ntBASIC3.31□□□□□ -1.88
CLK3P49761 Y_RNA.29-201ENST00000362570 113 ntBASIC3.31□□□□□ -1.88
CLK3P49761 Y_RNA.105-201ENST00000363182 111 ntBASIC3.31□□□□□ -1.88
CLK3P49761 SNORD27-201ENST00000363981 72 ntBASIC3.31□□□□□ -1.88
CLK3P49761 Y_RNA.245-201ENST00000364493 95 ntBASIC3.31□□□□□ -1.88
CLK3P49761 Y_RNA.462-201ENST00000384268 102 ntBASIC3.31□□□□□ -1.88
CLK3P49761 Y_RNA.539-201ENST00000384635 107 ntBASIC3.31□□□□□ -1.88
CLK3P49761 SNORA1.3-201ENST00000384676 136 ntBASIC3.31□□□□□ -1.88
CLK3P49761 U8.11-201ENST00000384699 133 ntBASIC3.31□□□□□ -1.88
CLK3P49761 U8.12-201ENST00000384701 133 ntBASIC3.31□□□□□ -1.88
CLK3P49761 SNORD58.1-201ENST00000391313 66 ntBASIC3.31□□□□□ -1.88
CLK3P49761 PTMAP2-201ENST00000397627 327 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RPS4XP3-201ENST00000398541 413 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNU6-121P-201ENST00000410525 99 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNA5SP293-201ENST00000410527 113 ntBASIC3.31□□□□□ -1.88
CLK3P49761 ATP5A1P2-201ENST00000412323 255 ntBASIC3.31□□□□□ -1.88
CLK3P49761 AL096701.2-201ENST00000416920 238 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RPL21P38-201ENST00000418090 167 ntBASIC3.31□□□□□ -1.88
CLK3P49761 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.31□□□□□ -1.88
CLK3P49761 AL451062.2-201ENST00000427515 271 ntBASIC3.31□□□□□ -1.88
CLK3P49761 AL445584.1-201ENST00000431451 330 ntBASIC3.31□□□□□ -1.88
CLK3P49761 HSPD1P21-201ENST00000436541 245 ntBASIC3.31□□□□□ -1.88
CLK3P49761 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK3P49761 AL513043.1-201ENST00000439124 535 ntBASIC3.31□□□□□ -1.88
CLK3P49761 AC125238.1-201ENST00000448842 249 ntBASIC3.31□□□□□ -1.88
CLK3P49761 SSXP4-201ENST00000451349 245 ntBASIC3.31□□□□□ -1.88
CLK3P49761 PRELID3BP1-201ENST00000457142 540 ntBASIC3.31□□□□□ -1.88
CLK3P49761 U8.18-201ENST00000459285 133 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RPL9P9-202ENST00000466501 579 ntBASIC3.31□□□□□ -1.88
CLK3P49761 MED28P2-201ENST00000475771 317 ntBASIC3.31□□□□□ -1.88
CLK3P49761 AC022493.1-201ENST00000492984 337 ntBASIC3.31□□□□□ -1.88
CLK3P49761 SUMO2P6-201ENST00000505273 288 ntBASIC3.31□□□□□ -1.88
CLK3P49761 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK3P49761 RNU1-86P-201ENST00000516108 154 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNU1-95P-201ENST00000516357 160 ntBASIC3.31□□□□□ -1.88
CLK3P49761 MIR892C-201ENST00000516410 77 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNU1-107P-201ENST00000516617 154 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNU1-128P-201ENST00000516704 160 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNU6-1282P-201ENST00000516735 96 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNU6-579P-201ENST00000516879 102 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNA5SP471-201ENST00000516971 106 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNA5SP290-201ENST00000517133 127 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNU6-1315P-201ENST00000517187 99 ntBASIC3.31□□□□□ -1.88
CLK3P49761 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
CLK3P49761 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK3P49761 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.31□□□□□ -1.88
CLK3P49761 AC026333.2-201ENST00000542164 106 ntBASIC3.31□□□□□ -1.88
CLK3P49761 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK3P49761 MIR1273C-201ENST00000578669 77 ntBASIC3.31□□□□□ -1.88
CLK3P49761 AC123912.5-201ENST00000605470 343 ntBASIC3.31□□□□□ -1.88
CLK3P49761 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.31□□□□□ -1.88
CLK3P49761 MIR6076-201ENST00000617521 113 ntBASIC3.31□□□□□ -1.88
CLK3P49761 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.31□□□□□ -1.88
CLK3P49761 CR392039.5-201ENST00000623201 510 ntBASIC3.31□□□□□ -1.88
CLK3P49761 Z99571.1-201ENST00000636677 394 ntBASIC3.31□□□□□ -1.88
CLK3P49761 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.31□□□□□ -1.88
CLK3P49761 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.31□□□□□ -1.88
CLK3P49761 MTND5P9-201ENST00000503854 1755 ntBASIC3.3□□□□□ -1.88
CLK3P49761 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK3P49761 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLK3P49761 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK3P49761 Y_RNA.84-201ENST00000363011 104 ntBASIC3.3□□□□□ -1.88
CLK3P49761 RNY1-201ENST00000364228 113 ntBASIC3.3□□□□□ -1.88
CLK3P49761 RNU6-512P-201ENST00000364438 103 ntBASIC3.3□□□□□ -1.88
CLK3P49761 RNU6-1317P-201ENST00000364582 104 ntBASIC3.3□□□□□ -1.88
CLK3P49761 RNU6-805P-201ENST00000365643 106 ntBASIC3.3□□□□□ -1.88
CLK3P49761 MIR301A-201ENST00000385261 86 ntBASIC3.3□□□□□ -1.88
CLK3P49761 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLK3P49761 RNU2-14P-201ENST00000411053 191 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms