Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.57□□□□□ -1.52
PRIM1P49642 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PRIM1P49642 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRIM1P49642 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.56□□□□□ -1.52
PRIM1P49642 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRIM1P49642 Y_RNA.172-201ENST00000363765 102 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 Y_RNA.420-201ENST00000384043 110 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 RNU6-629P-201ENST00000384061 103 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 MIR544A-201ENST00000384855 91 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 RN7SKP53-201ENST00000411337 315 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 HMGN2P30-201ENST00000423237 256 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 AC244670.1-201ENST00000436879 112 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 snoU13.4-201ENST00000458916 104 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 AC136628.3-201ENST00000521868 290 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 MIR3944-201ENST00000581277 108 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 AL606490.9-201ENST00000603331 271 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 AL359198.2-201ENST00000611836 194 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.56□□□□□ -1.52
PRIM1P49642 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.56□□□□□ -1.52
PRIM1P49642 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRIM1P49642 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PRIM1P49642 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.55□□□□□ -1.52
PRIM1P49642 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.55□□□□□ -1.52
PRIM1P49642 RNU1-20P-201ENST00000363314 162 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 RNU1-63P-201ENST00000383902 164 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 RNU6-710P-201ENST00000410424 105 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 RNA5SP146-201ENST00000410743 123 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.55□□□□□ -1.52
PRIM1P49642 AC093578.1-201ENST00000415219 368 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 AL357134.1-201ENST00000445848 426 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 AL133547.1-201ENST00000448546 220 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 AC125238.1-201ENST00000448842 249 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.55□□□□□ -1.52
PRIM1P49642 RNU1-103P-201ENST00000516502 125 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 AC021269.2-201ENST00000532318 330 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.55□□□□□ -1.52
PRIM1P49642 MIR3646-201ENST00000578301 84 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 MIR5685-201ENST00000579080 79 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 AC008739.3-201ENST00000603262 127 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.55□□□□□ -1.52
PRIM1P49642 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRIM1P49642 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRIM1P49642 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRIM1P49642 AC110774.1-201ENST00000623567 2018 ntBASIC5.55□□□□□ -1.52
PRIM1P49642 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PRIM1P49642 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.54□□□□□ -1.52
PRIM1P49642 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRIM1P49642 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.54□□□□□ -1.52
PRIM1P49642 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRIM1P49642 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRIM1P49642 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRIM1P49642 RNA5SP151-201ENST00000365632 117 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRIM1P49642 RNU6-763P-201ENST00000390865 106 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 YME1L1P1-201ENST00000429435 297 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 AC012308.1-201ENST00000451232 178 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 RPL26P9-201ENST00000457466 433 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 SNRPGP7-201ENST00000469016 106 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 AC026726.1-201ENST00000512859 601 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 RNU6-1282P-201ENST00000516735 96 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 RNU6-1234P-201ENST00000516877 103 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PRIM1P49642 DEFB131C-201ENST00000528817 165 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.54□□□□□ -1.52
PRIM1P49642 AC091178.1-203ENST00000584586 279 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 AC011603.4-201ENST00000611325 277 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.54□□□□□ -1.52
PRIM1P49642 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PRIM1P49642 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRIM1P49642 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PRIM1P49642 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PRIM1P49642 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRIM1P49642 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRIM1P49642 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PRIM1P49642 AC106871.1-201ENST00000568324 3102 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
PRIM1P49642 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.53□□□□□ -1.52
PRIM1P49642 SNORA63.1-201ENST00000362493 131 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 RNA5SP124-201ENST00000362739 110 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 SNORA73.2-201ENST00000364946 201 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 Y_RNA.542-201ENST00000384641 111 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 MIR449B-201ENST00000384995 97 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 MIR487A-201ENST00000385009 80 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 SNORD37.2-201ENST00000391075 66 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 RNU6-1064P-201ENST00000410626 104 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 ELOCP21-201ENST00000412558 336 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.53□□□□□ -1.52
PRIM1P49642 TBCAP1-201ENST00000436520 327 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PRIM1P49642 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PRIM1P49642 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.53□□□□□ -1.52
PRIM1P49642 RNU6-966P-201ENST00000516479 104 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 AC115990.1-201ENST00000526957 301 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.53□□□□□ -1.52
PRIM1P49642 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.53□□□□□ -1.52
PRIM1P49642 AL160290.3-201ENST00000604869 165 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 Y_RNA.802-201ENST00000614892 130 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 AC013791.1-201ENST00000616619 62 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 AP001340.1-201ENST00000624405 217 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms