Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNU6-336P-201ENST00000364891 107 ntBASIC2.8□□□□□ -1.96
CENPAP49450 Y_RNA.339-201ENST00000365325 102 ntBASIC2.8□□□□□ -1.96
CENPAP49450 SET-203ENST00000372688 801 ntTSL 2 BASIC2.8□□□□□ -1.96
CENPAP49450 RNU6-306P-201ENST00000384617 107 ntBASIC2.8□□□□□ -1.96
CENPAP49450 MIR7-3-201ENST00000384898 110 ntBASIC2.8□□□□□ -1.96
CENPAP49450 RNU6-1245P-201ENST00000411130 106 ntBASIC2.8□□□□□ -1.96
CENPAP49450 RNU6-325P-201ENST00000411132 105 ntBASIC2.8□□□□□ -1.96
CENPAP49450 AL030996.1-201ENST00000411430 235 ntBASIC2.8□□□□□ -1.96
CENPAP49450 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.8□□□□□ -1.96
CENPAP49450 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.8□□□□□ -1.96
CENPAP49450 PCMTD1P1-201ENST00000455560 355 ntBASIC2.8□□□□□ -1.96
CENPAP49450 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.8□□□□□ -1.96
CENPAP49450 MTCYBP40-201ENST00000509390 1135 ntBASIC2.8□□□□□ -1.96
CENPAP49450 FGF7P4-201ENST00000509595 295 ntBASIC2.8□□□□□ -1.96
CENPAP49450 SNORA31.15-201ENST00000516771 132 ntBASIC2.8□□□□□ -1.96
CENPAP49450 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.8□□□□□ -1.96
CENPAP49450 AC093027.1-201ENST00000546698 429 ntBASIC2.8□□□□□ -1.96
CENPAP49450 CR383656.8-201ENST00000549046 145 ntBASIC2.8□□□□□ -1.96
CENPAP49450 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.8□□□□□ -1.96
CENPAP49450 MIR4795-201ENST00000584182 89 ntBASIC2.8□□□□□ -1.96
CENPAP49450 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.8□□□□□ -1.96
CENPAP49450 AL161756.2-201ENST00000604597 246 ntBASIC2.8□□□□□ -1.96
CENPAP49450 AC016727.1-205ENST00000605437 569 ntBASIC2.8□□□□□ -1.96
CENPAP49450 AC138627.2-201ENST00000624202 601 ntBASIC2.8□□□□□ -1.96
CENPAP49450 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CENPAP49450 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CENPAP49450 MTND4P23-201ENST00000447723 1363 ntBASIC2.79□□□□□ -1.96
CENPAP49450 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CENPAP49450 Y_RNA.67-201ENST00000362870 100 ntBASIC2.79□□□□□ -1.96
CENPAP49450 RNU6-105P-201ENST00000363909 104 ntBASIC2.79□□□□□ -1.96
CENPAP49450 Y_RNA.474-201ENST00000384341 102 ntBASIC2.79□□□□□ -1.96
CENPAP49450 SNORD15B-201ENST00000384714 146 ntBASIC2.79□□□□□ -1.96
CENPAP49450 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.79□□□□□ -1.96
CENPAP49450 RN7SKP158-201ENST00000410453 326 ntBASIC2.79□□□□□ -1.96
CENPAP49450 RNU4-47P-201ENST00000410876 114 ntBASIC2.79□□□□□ -1.96
CENPAP49450 FABP5P14-201ENST00000437273 393 ntBASIC2.79□□□□□ -1.96
CENPAP49450 U8.21-201ENST00000459536 136 ntBASIC2.79□□□□□ -1.96
CENPAP49450 RPL23AP70-201ENST00000483361 460 ntBASIC2.79□□□□□ -1.96
CENPAP49450 RNU6-559P-201ENST00000516151 98 ntBASIC2.79□□□□□ -1.96
CENPAP49450 RNU6-277P-201ENST00000516272 106 ntBASIC2.79□□□□□ -1.96
CENPAP49450 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.79□□□□□ -1.96
CENPAP49450 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.79□□□□□ -1.96
CENPAP49450 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.79□□□□□ -1.96
CENPAP49450 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.79□□□□□ -1.96
CENPAP49450 AC011471.1-201ENST00000585766 187 ntBASIC2.79□□□□□ -1.96
CENPAP49450 POLR3GP2-201ENST00000588366 668 ntBASIC2.79□□□□□ -1.96
CENPAP49450 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.79□□□□□ -1.96
CENPAP49450 C8orf59P2-201ENST00000603441 271 ntBASIC2.79□□□□□ -1.96
CENPAP49450 AC124303.1-201ENST00000605703 360 ntBASIC2.79□□□□□ -1.96
CENPAP49450 MIR3529-201ENST00000637713 78 ntBASIC2.79□□□□□ -1.96
CENPAP49450 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CENPAP49450 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CENPAP49450 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CENPAP49450 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.78□□□□□ -1.96
CENPAP49450 MIR208A-201ENST00000362287 71 ntBASIC2.78□□□□□ -1.96
CENPAP49450 SNORA63.1-201ENST00000362493 131 ntBASIC2.78□□□□□ -1.96
CENPAP49450 Y_RNA.61-201ENST00000362835 102 ntBASIC2.78□□□□□ -1.96
CENPAP49450 RNU6-1317P-201ENST00000364582 104 ntBASIC2.78□□□□□ -1.96
CENPAP49450 Y_RNA.387-201ENST00000383918 102 ntBASIC2.78□□□□□ -1.96
CENPAP49450 RNU1-138P-201ENST00000384093 164 ntBASIC2.78□□□□□ -1.96
CENPAP49450 RNU6-601P-201ENST00000384540 107 ntBASIC2.78□□□□□ -1.96
CENPAP49450 MIR517A-201ENST00000385001 87 ntBASIC2.78□□□□□ -1.96
CENPAP49450 U3.19-201ENST00000390893 196 ntBASIC2.78□□□□□ -1.96
CENPAP49450 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CENPAP49450 AC074117.2-201ENST00000417130 397 ntBASIC2.78□□□□□ -1.96
CENPAP49450 Z82205.1-201ENST00000428456 297 ntBASIC2.78□□□□□ -1.96
CENPAP49450 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.78□□□□□ -1.96
CENPAP49450 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.78□□□□□ -1.96
CENPAP49450 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CENPAP49450 AC006028.1-201ENST00000438379 402 ntBASIC2.78□□□□□ -1.96
CENPAP49450 PRSS3P4-201ENST00000453323 162 ntBASIC2.78□□□□□ -1.96
CENPAP49450 AC013470.1-201ENST00000453438 462 ntBASIC2.78□□□□□ -1.96
CENPAP49450 AC008571.1-201ENST00000467232 300 ntBASIC2.78□□□□□ -1.96
CENPAP49450 RPL31P41-201ENST00000477967 372 ntBASIC2.78□□□□□ -1.96
CENPAP49450 AC109925.1-201ENST00000478069 331 ntBASIC2.78□□□□□ -1.96
CENPAP49450 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.78□□□□□ -1.96
CENPAP49450 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.78□□□□□ -1.96
CENPAP49450 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.78□□□□□ -1.96
CENPAP49450 AP002404.1-201ENST00000532005 451 ntBASIC2.78□□□□□ -1.96
CENPAP49450 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.78□□□□□ -1.96
CENPAP49450 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.78□□□□□ -1.96
CENPAP49450 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.78□□□□□ -1.96
CENPAP49450 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.78□□□□□ -1.96
CENPAP49450 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.78□□□□□ -1.96
CENPAP49450 AL161423.1-201ENST00000613700 262 ntBASIC2.78□□□□□ -1.96
CENPAP49450 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.78□□□□□ -1.96
CENPAP49450 AC010297.1-201ENST00000623948 149 ntBASIC2.78□□□□□ -1.96
CENPAP49450 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.78□□□□□ -1.96
CENPAP49450 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CENPAP49450 AL035425.3-201ENST00000564206 4996 ntBASIC2.78□□□□□ -1.97
CENPAP49450 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CENPAP49450 AC093831.2-201ENST00000624393 3427 ntBASIC2.77□□□□□ -1.97
CENPAP49450 Z82209.1-201ENST00000422141 2135 ntBASIC2.77□□□□□ -1.97
CENPAP49450 Y_RNA.58-201ENST00000362807 102 ntBASIC2.77□□□□□ -1.97
CENPAP49450 Y_RNA.154-201ENST00000363624 102 ntBASIC2.77□□□□□ -1.97
CENPAP49450 RNY3P1-201ENST00000365085 102 ntBASIC2.77□□□□□ -1.97
CENPAP49450 RNY3-201ENST00000365484 102 ntBASIC2.77□□□□□ -1.97
CENPAP49450 Y_RNA.482-201ENST00000384377 111 ntBASIC2.77□□□□□ -1.97
CENPAP49450 Y_RNA.490-201ENST00000384413 102 ntBASIC2.77□□□□□ -1.97
CENPAP49450 MIR521-1-201ENST00000384902 87 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms