Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SNORA75-201ENST00000384158 137 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AF228730.1-201ENST00000397972 663 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 MIR1262-201ENST00000408276 93 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 RNA5SP390-201ENST00000410191 113 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AC244636.1-201ENST00000421152 228 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.66□□□□□ -2.14
CX3CR1P49238 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CX3CR1P49238 AC244505.5-201ENST00000443639 207 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.66□□□□□ -2.14
CX3CR1P49238 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.66□□□□□ -2.14
CX3CR1P49238 MTND3P25-201ENST00000509243 135 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 SNORA43.2-201ENST00000516652 128 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.66□□□□□ -2.14
CX3CR1P49238 AP005639.2-201ENST00000527592 928 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AP003072.2-201ENST00000527756 676 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 BNIP3P6-201ENST00000549284 499 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AC137800.2-201ENST00000574375 120 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AC090897.2-201ENST00000581715 130 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AL670379.2-201ENST00000604983 252 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AL670379.4-201ENST00000605279 254 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 MIR98-201ENST00000606724 119 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.66□□□□□ -2.14
CX3CR1P49238 AC073114.1-201ENST00000612027 490 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AL132822.1-201ENST00000617063 513 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 SCARNA4-202ENST00000625402 129 ntBASIC1.66□□□□□ -2.14
CX3CR1P49238 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.66□□□□□ -2.14
CX3CR1P49238 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
CX3CR1P49238 RNU6-212P-201ENST00000362642 104 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 RNU6-179P-201ENST00000363350 107 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 RNU6-1210P-201ENST00000363775 107 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 Y_RNA.201-201ENST00000364052 96 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 SNORA62.1-201ENST00000364287 154 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 RNU4-91P-201ENST00000364778 135 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 RNU6-611P-201ENST00000384276 104 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 SNORA8-201ENST00000384574 139 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 CBX3P9-201ENST00000402326 552 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 MIR1283-2-201ENST00000408621 87 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 RNU2-3P-201ENST00000410144 191 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 RNU2-23P-201ENST00000410545 195 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 RNU2-8P-201ENST00000410727 190 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 RNA5SP111-201ENST00000411386 101 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.65□□□□□ -2.15
CX3CR1P49238 RPL21P90-201ENST00000415692 466 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 BX510359.4-201ENST00000423750 193 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 AL365400.1-201ENST00000431854 640 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.65□□□□□ -2.15
CX3CR1P49238 AC104058.1-201ENST00000448028 297 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 SNRPFP4-201ENST00000456366 242 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 PRELID3BP1-201ENST00000457142 540 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 RPL38P4-201ENST00000502376 214 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.65□□□□□ -2.15
CX3CR1P49238 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.65□□□□□ -2.15
CX3CR1P49238 SNORD27.1-201ENST00000516319 72 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.65□□□□□ -2.15
CX3CR1P49238 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.65□□□□□ -2.15
CX3CR1P49238 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.65□□□□□ -2.15
CX3CR1P49238 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.65□□□□□ -2.15
CX3CR1P49238 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.65□□□□□ -2.15
CX3CR1P49238 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.65□□□□□ -2.15
CX3CR1P49238 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
CX3CR1P49238 AP005136.1-201ENST00000579765 429 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 MIR4775-201ENST00000581168 75 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 AC098848.2-201ENST00000588023 330 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.65□□□□□ -2.15
CX3CR1P49238 AL078605.1-201ENST00000603529 500 ntBASIC1.65□□□□□ -2.15
CX3CR1P49238 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
CX3CR1P49238 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CX3CR1P49238 OR4G2P-201ENST00000328113 903 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CX3CR1P49238 RNU6-944P-201ENST00000364023 107 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 RNU6-1303P-201ENST00000364841 107 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 Y_RNA.500-201ENST00000384466 111 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 MIR29C-201ENST00000385231 88 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 RNU6-550P-201ENST00000391057 101 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 RNU11-3P-201ENST00000391111 133 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 RPL17P50-201ENST00000396131 546 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 RN7SKP192-201ENST00000411291 327 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 CYCSP33-201ENST00000414485 327 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 C1DP2-201ENST00000418167 426 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.64□□□□□ -2.15
CX3CR1P49238 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.64□□□□□ -2.15
CX3CR1P49238 AL669831.1-202ENST00000428504 417 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.64□□□□□ -2.15
CX3CR1P49238 AL358934.1-201ENST00000432346 324 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 HMGN2P3-201ENST00000433603 273 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.64□□□□□ -2.15
CX3CR1P49238 HMGN2P5-201ENST00000436882 273 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 GTF2IP13-201ENST00000438487 386 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 AL136380.1-201ENST00000447970 162 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.64□□□□□ -2.15
CX3CR1P49238 RPL30P12-201ENST00000474666 353 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 HMGB3P17-201ENST00000504195 649 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.64□□□□□ -2.15
CX3CR1P49238 AC104806.1-201ENST00000508720 308 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CX3CR1P49238 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.64□□□□□ -2.15
CX3CR1P49238 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.64□□□□□ -2.15
CX3CR1P49238 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.64□□□□□ -2.15
CX3CR1P49238 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 MIR4528-201ENST00000577763 90 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms