Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 RNA5SP489-201ENST00000410986 109 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.66□□□□□ -2.14
CSNK1A1P48729 UBE2V1P10-201ENST00000414685 269 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.66□□□□□ -2.14
CSNK1A1P48729 MTND1P26-201ENST00000440488 538 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 AC079781.2-201ENST00000446424 169 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 RPL23AP6-201ENST00000446637 472 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 AL162395.1-201ENST00000457882 422 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.66□□□□□ -2.14
CSNK1A1P48729 AC018868.1-201ENST00000491307 315 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 SNORD27.1-201ENST00000516319 72 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 SNORA43.2-201ENST00000516652 128 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 MTND3P12-201ENST00000559068 328 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 MIR3913-1-201ENST00000577744 102 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
CSNK1A1P48729 MIR5692A1-201ENST00000580523 69 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.66□□□□□ -2.14
CSNK1A1P48729 RNU6-1097P-201ENST00000363586 107 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 RNU1-57P-201ENST00000384491 166 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 MIR29C-201ENST00000385231 88 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 MIR454-201ENST00000390180 115 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 RNU6-550P-201ENST00000391057 101 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AL591034.2-201ENST00000402839 359 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 RNU6-607P-201ENST00000411283 108 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 CYCSP33-201ENST00000414485 327 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC074117.2-201ENST00000417130 397 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC138623.1-201ENST00000418060 216 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 C1DP2-201ENST00000418167 426 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC244636.1-201ENST00000421152 228 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 RPL31P63-201ENST00000422565 375 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC244505.5-201ENST00000443639 207 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC079448.1-201ENST00000449377 373 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.65□□□□□ -2.15
CSNK1A1P48729 AL137159.1-201ENST00000452808 512 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC098862.1-201ENST00000504991 413 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.65□□□□□ -2.15
CSNK1A1P48729 MTCO3P9-201ENST00000506989 781 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC109329.1-201ENST00000518744 317 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AP002453.2-201ENST00000533503 320 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.65□□□□□ -2.15
CSNK1A1P48729 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.65□□□□□ -2.15
CSNK1A1P48729 RPL30P11-203ENST00000598995 310 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AL078605.1-201ENST00000603529 500 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC245014.2-201ENST00000603689 287 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 Z84480.1-201ENST00000605131 311 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC246785.4-201ENST00000605374 287 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 AC098614.4-201ENST00000607601 462 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 RMST_4.1-201ENST00000616886 107 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 SCARNA4-202ENST00000625402 129 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CSNK1A1P48729 HAUS6P2-201ENST00000433254 2404 ntBASIC1.65□□□□□ -2.15
CSNK1A1P48729 OR4G2P-201ENST00000328113 903 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 RNA5SP276-201ENST00000362580 94 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 Y_RNA.40-201ENST00000362645 93 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 SNORD114-1-201ENST00000362705 72 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 RNU6-181P-201ENST00000363225 107 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 Y_RNA.201-201ENST00000364052 96 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 SNORA16.1-201ENST00000364597 132 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 RNU6-487P-201ENST00000365430 104 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 SNORD116-8-201ENST00000384365 95 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 MIR186-201ENST00000384988 86 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.64□□□□□ -2.15
CSNK1A1P48729 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.64□□□□□ -2.15
CSNK1A1P48729 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.64□□□□□ -2.15
CSNK1A1P48729 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.64□□□□□ -2.15
CSNK1A1P48729 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.64□□□□□ -2.15
CSNK1A1P48729 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.64□□□□□ -2.15
CSNK1A1P48729 RNU1-41P-201ENST00000516161 162 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 RNU2-53P-201ENST00000516257 147 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 RNU1-48P-201ENST00000516400 162 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 RNU6-445P-201ENST00000516949 107 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 AC007834.2-201ENST00000536310 343 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.64□□□□□ -2.15
CSNK1A1P48729 OSBPL9P5-201ENST00000542581 171 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.64□□□□□ -2.15
CSNK1A1P48729 IMMP1LP2-201ENST00000552954 492 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 AC073410.2-201ENST00000603240 332 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 AC121247.2-201ENST00000604776 136 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 AL773524.1-201ENST00000614065 229 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 uc_338.15-201ENST00000615470 191 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 U6.114-201ENST00000636407 96 ntBASIC1.64□□□□□ -2.15
CSNK1A1P48729 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CSNK1A1P48729 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.63□□□□□ -2.15
CSNK1A1P48729 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CSNK1A1P48729 RNU6-1287P-201ENST00000362914 107 ntBASIC1.63□□□□□ -2.15
CSNK1A1P48729 RNU1-23P-201ENST00000363361 144 ntBASIC1.63□□□□□ -2.15
CSNK1A1P48729 RNU6-1029P-201ENST00000384109 107 ntBASIC1.63□□□□□ -2.15
CSNK1A1P48729 RNU6-45P-201ENST00000384471 107 ntBASIC1.63□□□□□ -2.15
CSNK1A1P48729 SNORA8-201ENST00000384574 139 ntBASIC1.63□□□□□ -2.15
CSNK1A1P48729 RNU6-1060P-201ENST00000384664 107 ntBASIC1.63□□□□□ -2.15
CSNK1A1P48729 MIR583-201ENST00000384846 75 ntBASIC1.63□□□□□ -2.15
CSNK1A1P48729 RNA5SP465-201ENST00000391195 109 ntBASIC1.63□□□□□ -2.15
CSNK1A1P48729 RN7SKP142-201ENST00000411236 328 ntBASIC1.63□□□□□ -2.15
CSNK1A1P48729 PIGFP2-201ENST00000421400 651 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms