Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC009318.2-201ENST00000610917 651 ntBASIC2.87□□□□□ -1.95
SOX2P48431 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.87□□□□□ -1.95
SOX2P48431 AC007485.1-201ENST00000616755 206 ntBASIC2.87□□□□□ -1.95
SOX2P48431 AL691447.3-201ENST00000635020 330 ntBASIC2.87□□□□□ -1.95
SOX2P48431 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
SOX2P48431 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SOX2P48431 HAUS6P2-201ENST00000433254 2404 ntBASIC2.87□□□□□ -1.95
SOX2P48431 AC009541.1-201ENST00000438279 2662 ntBASIC2.86□□□□□ -1.95
SOX2P48431 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SOX2P48431 RNU4-35P-201ENST00000362588 141 ntBASIC2.86□□□□□ -1.95
SOX2P48431 SNORD50.1-201ENST00000362987 71 ntBASIC2.86□□□□□ -1.95
SOX2P48431 RNU1-115P-201ENST00000365329 160 ntBASIC2.86□□□□□ -1.95
SOX2P48431 Y_RNA.364-201ENST00000365532 101 ntBASIC2.86□□□□□ -1.95
SOX2P48431 RNU6-1032P-201ENST00000384100 107 ntBASIC2.86□□□□□ -1.95
SOX2P48431 RNY1P14-201ENST00000384426 108 ntBASIC2.86□□□□□ -1.95
SOX2P48431 RNU6-843P-201ENST00000384454 104 ntBASIC2.86□□□□□ -1.95
SOX2P48431 RNU6-738P-201ENST00000384531 106 ntBASIC2.86□□□□□ -1.95
SOX2P48431 Y_RNA.577-201ENST00000384794 101 ntBASIC2.86□□□□□ -1.95
SOX2P48431 SNORD17-201ENST00000390930 237 ntBASIC2.86□□□□□ -1.95
SOX2P48431 RNU2-49P-201ENST00000410666 184 ntBASIC2.86□□□□□ -1.95
SOX2P48431 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.86□□□□□ -1.95
SOX2P48431 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.86□□□□□ -1.95
SOX2P48431 PTGES3P4-201ENST00000426243 356 ntBASIC2.86□□□□□ -1.95
SOX2P48431 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.86□□□□□ -1.95
SOX2P48431 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.86□□□□□ -1.95
SOX2P48431 AC092185.1-201ENST00000491371 97 ntBASIC2.86□□□□□ -1.95
SOX2P48431 AC097462.2-201ENST00000504623 481 ntBASIC2.86□□□□□ -1.95
SOX2P48431 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.86□□□□□ -1.95
SOX2P48431 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.86□□□□□ -1.95
SOX2P48431 IGKV2-26-201ENST00000518305 343 ntBASIC2.86□□□□□ -1.95
SOX2P48431 AP000889.1-201ENST00000530968 660 ntBASIC2.86□□□□□ -1.95
SOX2P48431 MIR3160-1-201ENST00000577972 85 ntBASIC2.86□□□□□ -1.95
SOX2P48431 VN1R85P-201ENST00000601587 426 ntBASIC2.86□□□□□ -1.95
SOX2P48431 AC091925.1-201ENST00000623204 462 ntBASIC2.86□□□□□ -1.95
SOX2P48431 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.86□□□□□ -1.95
SOX2P48431 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SOX2P48431 AL356274.2-201ENST00000624379 3752 ntBASIC2.85□□□□□ -1.95
SOX2P48431 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SOX2P48431 RNA5SP119-201ENST00000362715 117 ntBASIC2.85□□□□□ -1.95
SOX2P48431 RNU6-595P-201ENST00000363944 107 ntBASIC2.85□□□□□ -1.95
SOX2P48431 SNORA63C-201ENST00000364578 129 ntBASIC2.85□□□□□ -1.95
SOX2P48431 RNU6-99P-201ENST00000364721 107 ntBASIC2.85□□□□□ -1.95
SOX2P48431 RNA5SP479-201ENST00000364858 117 ntBASIC2.85□□□□□ -1.95
SOX2P48431 RNU1-140P-201ENST00000365040 165 ntBASIC2.85□□□□□ -1.95
SOX2P48431 Y_RNA.496-201ENST00000384444 101 ntBASIC2.85□□□□□ -1.95
SOX2P48431 RNU6-19P-201ENST00000384718 107 ntBASIC2.85□□□□□ -1.95
SOX2P48431 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SOX2P48431 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.85□□□□□ -1.95
SOX2P48431 AC096649.2-201ENST00000416186 393 ntBASIC2.85□□□□□ -1.95
SOX2P48431 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.85□□□□□ -1.95
SOX2P48431 CYCSP4-201ENST00000429682 331 ntBASIC2.85□□□□□ -1.95
SOX2P48431 AC007969.2-201ENST00000441891 191 ntBASIC2.85□□□□□ -1.95
SOX2P48431 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.85□□□□□ -1.95
SOX2P48431 GSTA11P-201ENST00000452866 669 ntBASIC2.85□□□□□ -1.95
SOX2P48431 AC079354.2-201ENST00000453523 154 ntBASIC2.85□□□□□ -1.95
SOX2P48431 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.85□□□□□ -1.95
SOX2P48431 AC107626.1-201ENST00000471084 183 ntBASIC2.85□□□□□ -1.95
SOX2P48431 SNORA31.23-201ENST00000517219 133 ntBASIC2.85□□□□□ -1.95
SOX2P48431 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.85□□□□□ -1.95
SOX2P48431 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.85□□□□□ -1.95
SOX2P48431 AC074050.1-201ENST00000563247 211 ntBASIC2.85□□□□□ -1.95
SOX2P48431 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.85□□□□□ -1.95
SOX2P48431 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.85□□□□□ -1.95
SOX2P48431 AL356157.2-201ENST00000605122 111 ntBASIC2.85□□□□□ -1.95
SOX2P48431 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.85□□□□□ -1.95
SOX2P48431 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
SOX2P48431 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.85□□□□□ -1.95
SOX2P48431 AC103988.1-201ENST00000566382 2177 ntBASIC2.85□□□□□ -1.95
SOX2P48431 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SOX2P48431 MTND4P1-201ENST00000457501 1466 ntBASIC2.84□□□□□ -1.95
SOX2P48431 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SOX2P48431 AC010889.1-201ENST00000566193 2666 ntBASIC2.84□□□□□ -1.95
SOX2P48431 Y_RNA.314-201ENST00000365114 102 ntBASIC2.84□□□□□ -1.95
SOX2P48431 RNU6-487P-201ENST00000365430 104 ntBASIC2.84□□□□□ -1.95
SOX2P48431 RNU6-700P-201ENST00000391043 107 ntBASIC2.84□□□□□ -1.95
SOX2P48431 MRPL42P3-201ENST00000401492 326 ntBASIC2.84□□□□□ -1.95
SOX2P48431 AL138885.1-201ENST00000405921 675 ntBASIC2.84□□□□□ -1.95
SOX2P48431 RNU6-1156P-201ENST00000410365 100 ntBASIC2.84□□□□□ -1.95
SOX2P48431 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.84□□□□□ -1.95
SOX2P48431 MRPS18CP6-201ENST00000423587 223 ntBASIC2.84□□□□□ -1.95
SOX2P48431 AL160004.2-201ENST00000432935 350 ntBASIC2.84□□□□□ -1.95
SOX2P48431 AL353705.1-201ENST00000433468 480 ntBASIC2.84□□□□□ -1.95
SOX2P48431 AL441985.1-201ENST00000457727 251 ntBASIC2.84□□□□□ -1.95
SOX2P48431 AC105758.1-201ENST00000506038 399 ntBASIC2.84□□□□□ -1.95
SOX2P48431 AC009812.2-201ENST00000517657 457 ntBASIC2.84□□□□□ -1.95
SOX2P48431 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.84□□□□□ -1.95
SOX2P48431 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.84□□□□□ -1.95
SOX2P48431 AC025281.1-201ENST00000567026 265 ntBASIC2.84□□□□□ -1.95
SOX2P48431 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.84□□□□□ -1.95
SOX2P48431 AC092447.9-201ENST00000603395 144 ntBASIC2.84□□□□□ -1.95
SOX2P48431 7SK.7-201ENST00000603504 247 ntBASIC2.84□□□□□ -1.95
SOX2P48431 AC091152.3-201ENST00000604227 325 ntBASIC2.84□□□□□ -1.95
SOX2P48431 AC116312.1-201ENST00000606841 314 ntBASIC2.84□□□□□ -1.95
SOX2P48431 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.84□□□□□ -1.95
SOX2P48431 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.84□□□□□ -1.96
SOX2P48431 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SOX2P48431 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SOX2P48431 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SOX2P48431 Y_RNA.145-201ENST00000363527 102 ntBASIC2.83□□□□□ -1.96
SOX2P48431 Y_RNA.158-201ENST00000363651 101 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms