Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.64□□□□□ -2.15
CXCL12P48061 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.64□□□□□ -2.15
CXCL12P48061 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.64□□□□□ -2.15
CXCL12P48061 AL158211.1-201ENST00000566763 763 ntBASIC1.64□□□□□ -2.15
CXCL12P48061 AC104581.2-201ENST00000572227 430 ntBASIC1.64□□□□□ -2.15
CXCL12P48061 AC137800.2-201ENST00000574375 120 ntBASIC1.64□□□□□ -2.15
CXCL12P48061 AP001486.3-201ENST00000615334 372 ntBASIC1.64□□□□□ -2.15
CXCL12P48061 AP001506.1-201ENST00000615444 211 ntBASIC1.64□□□□□ -2.15
CXCL12P48061 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
CXCL12P48061 DUXAP9-208ENST00000622815 614 ntBASIC1.64□□□□□ -2.15
CXCL12P48061 AC093648.1-201ENST00000623546 606 ntBASIC1.64□□□□□ -2.15
CXCL12P48061 AC233981.2-201ENST00000611524 1614 ntBASIC1.64□□□□□ -2.15
CXCL12P48061 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CXCL12P48061 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CXCL12P48061 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CXCL12P48061 MIR412-201ENST00000362142 91 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RNU6-858P-201ENST00000362436 107 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RNU1-72P-201ENST00000362976 153 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RNU6-179P-201ENST00000363350 107 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RNU6-371P-201ENST00000364283 108 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RNU6-1179P-201ENST00000384667 107 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 MIR10A-201ENST00000385043 110 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 EEF1A1P40-201ENST00000412883 573 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 EIF4EP4-201ENST00000424916 578 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RPS3AP44-201ENST00000425466 790 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RPL31P35-201ENST00000431058 377 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 AL360271.2-201ENST00000447710 161 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 AL136380.1-201ENST00000447970 162 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RPS27AP8-201ENST00000452665 445 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 snoU109.1-201ENST00000459339 135 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RPL7P43-201ENST00000478876 753 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RPL22P13-201ENST00000493291 347 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 AC116562.3-201ENST00000506136 177 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RNU5B-3P-201ENST00000516601 115 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 RNU7-193P-201ENST00000516723 65 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 AC068587.5-201ENST00000528506 175 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.63□□□□□ -2.15
CXCL12P48061 AC079598.5-201ENST00000547460 117 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.63□□□□□ -2.15
CXCL12P48061 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.63□□□□□ -2.15
CXCL12P48061 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.63□□□□□ -2.15
CXCL12P48061 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.63□□□□□ -2.15
CXCL12P48061 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.63□□□□□ -2.15
CXCL12P48061 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.63□□□□□ -2.15
CXCL12P48061 MIR3682-201ENST00000581338 84 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 SNORA4-201ENST00000584302 138 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 AC078899.2-201ENST00000595282 212 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 Z94722.1-201ENST00000604328 474 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.63□□□□□ -2.15
CXCL12P48061 AC009233.1-201ENST00000616477 371 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 AC092656.1-203ENST00000624134 423 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 AL359740.1-201ENST00000624340 592 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 AL354685.2-201ENST00000448218 1447 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 AC009487.4-201ENST00000624969 3585 ntBASIC1.63□□□□□ -2.15
CXCL12P48061 FGF7P2-201ENST00000332473 296 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CXCL12P48061 SNORD14B-201ENST00000364533 90 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 SNORA16B-201ENST00000364674 135 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 RNU6-384P-201ENST00000364900 104 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 Y_RNA.576-201ENST00000384781 102 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CXCL12P48061 AL049545.1-201ENST00000401856 572 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 RNU6-248P-201ENST00000410720 107 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.62□□□□□ -2.15
CXCL12P48061 AL627311.1-201ENST00000431514 115 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 AC000111.3-201ENST00000433478 193 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 AL353706.1-201ENST00000436728 494 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.62□□□□□ -2.15
CXCL12P48061 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.62□□□□□ -2.15
CXCL12P48061 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.62□□□□□ -2.15
CXCL12P48061 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.62□□□□□ -2.15
CXCL12P48061 RNA5SP269-201ENST00000459032 137 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 SNORD42A-201ENST00000459584 64 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 BET1P1-201ENST00000482276 359 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 AC008526.1-201ENST00000509149 338 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 MIR892C-201ENST00000516410 77 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 SNORA18.6-201ENST00000516792 115 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 RNU2-44P-201ENST00000516795 194 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 RNU1-92P-201ENST00000517017 135 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.62□□□□□ -2.15
CXCL12P48061 MTCYBP33-201ENST00000575007 1130 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 AC098848.2-201ENST00000588023 330 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.62□□□□□ -2.15
CXCL12P48061 AC025165.5-201ENST00000602802 578 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 MIR98-201ENST00000606724 119 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 U6.42-201ENST00000618440 107 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 FARSBP1-201ENST00000435808 1778 ntBASIC1.62□□□□□ -2.15
CXCL12P48061 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.61□□□□□ -2.15
CXCL12P48061 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.61□□□□□ -2.15
CXCL12P48061 RNU6-942P-201ENST00000363002 107 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 SNORD115-7-201ENST00000365306 82 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 Y_RNA.367-201ENST00000365544 101 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 RNU6-72P-201ENST00000384285 79 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 MIR676-201ENST00000390702 67 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 RPL21P90-201ENST00000415692 466 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.61□□□□□ -2.15
CXCL12P48061 MTND3P17-201ENST00000416968 344 ntBASIC1.61□□□□□ -2.15
CXCL12P48061 BX295541.1-201ENST00000417774 250 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms