Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.53□□□□□ -2.16
RFC3P40938 HSPE1P21-201ENST00000438283 308 ntBASIC1.53□□□□□ -2.16
RFC3P40938 AL353752.1-201ENST00000454946 260 ntBASIC1.53□□□□□ -2.16
RFC3P40938 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
RFC3P40938 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
RFC3P40938 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.53□□□□□ -2.16
RFC3P40938 AC022880.1-201ENST00000534017 973 ntBASIC1.53□□□□□ -2.16
RFC3P40938 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.53□□□□□ -2.16
RFC3P40938 ELOCP32-201ENST00000548625 324 ntBASIC1.53□□□□□ -2.16
RFC3P40938 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.53□□□□□ -2.16
RFC3P40938 AC002400.1-201ENST00000569310 726 ntBASIC1.53□□□□□ -2.16
RFC3P40938 AC008521.1-201ENST00000587471 187 ntBASIC1.53□□□□□ -2.16
RFC3P40938 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.53□□□□□ -2.16
RFC3P40938 AC012065.4-201ENST00000602445 679 ntBASIC1.53□□□□□ -2.16
RFC3P40938 SEPT7P9-203ENST00000604116 343 ntBASIC1.53□□□□□ -2.16
RFC3P40938 AL451064.1-201ENST00000607718 471 ntBASIC1.53□□□□□ -2.16
RFC3P40938 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RFC3P40938 AC006026.1-201ENST00000444025 1803 ntBASIC1.52□□□□□ -2.17
RFC3P40938 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
RFC3P40938 U8.3-201ENST00000363321 132 ntBASIC1.52□□□□□ -2.17
RFC3P40938 RNU6-1164P-201ENST00000364428 107 ntBASIC1.52□□□□□ -2.17
RFC3P40938 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
RFC3P40938 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.52□□□□□ -2.17
RFC3P40938 U8.10-201ENST00000384260 133 ntBASIC1.52□□□□□ -2.17
RFC3P40938 AL033519.2-201ENST00000403958 392 ntBASIC1.52□□□□□ -2.17
RFC3P40938 RNU4-62P-201ENST00000410125 130 ntBASIC1.52□□□□□ -2.17
RFC3P40938 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.52□□□□□ -2.17
RFC3P40938 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.52□□□□□ -2.17
RFC3P40938 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.52□□□□□ -2.17
RFC3P40938 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.52□□□□□ -2.17
RFC3P40938 RNU1-86P-201ENST00000516108 154 ntBASIC1.52□□□□□ -2.17
RFC3P40938 RNU1-107P-201ENST00000516617 154 ntBASIC1.52□□□□□ -2.17
RFC3P40938 HSBP1P1-201ENST00000555205 166 ntBASIC1.52□□□□□ -2.17
RFC3P40938 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.52□□□□□ -2.17
RFC3P40938 MIR3618-201ENST00000580330 88 ntBASIC1.52□□□□□ -2.17
RFC3P40938 AC016597.2-201ENST00000613256 341 ntBASIC1.52□□□□□ -2.17
RFC3P40938 MIR7844-201ENST00000616161 122 ntBASIC1.52□□□□□ -2.17
RFC3P40938 U1.36-201ENST00000620684 176 ntBASIC1.52□□□□□ -2.17
RFC3P40938 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.52□□□□□ -2.17
RFC3P40938 MIR378A-201ENST00000362177 66 ntBASIC1.51□□□□□ -2.17
RFC3P40938 RNU1-58P-201ENST00000362413 163 ntBASIC1.51□□□□□ -2.17
RFC3P40938 Y_RNA.22-201ENST00000362492 102 ntBASIC1.51□□□□□ -2.17
RFC3P40938 SNORD56.1-201ENST00000362913 68 ntBASIC1.51□□□□□ -2.17
RFC3P40938 RNU6-61P-201ENST00000365528 109 ntBASIC1.51□□□□□ -2.17
RFC3P40938 RNU6-641P-201ENST00000384006 107 ntBASIC1.51□□□□□ -2.17
RFC3P40938 FGF7P8-201ENST00000402994 292 ntBASIC1.51□□□□□ -2.17
RFC3P40938 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.51□□□□□ -2.17
RFC3P40938 OR9R1P-201ENST00000412200 877 ntBASIC1.51□□□□□ -2.17
RFC3P40938 AC009310.1-201ENST00000414414 451 ntBASIC1.51□□□□□ -2.17
RFC3P40938 HMGB1P31-201ENST00000437242 427 ntBASIC1.51□□□□□ -2.17
RFC3P40938 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.51□□□□□ -2.17
RFC3P40938 RPL30P1-201ENST00000488676 339 ntBASIC1.51□□□□□ -2.17
RFC3P40938 MTCO3P9-201ENST00000506989 781 ntBASIC1.51□□□□□ -2.17
RFC3P40938 RBBP4P6-201ENST00000508098 202 ntBASIC1.51□□□□□ -2.17
RFC3P40938 MRPS36P3-201ENST00000519284 130 ntBASIC1.51□□□□□ -2.17
RFC3P40938 MTND2P32-201ENST00000521584 1038 ntBASIC1.51□□□□□ -2.17
RFC3P40938 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.51□□□□□ -2.17
RFC3P40938 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.51□□□□□ -2.17
RFC3P40938 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.51□□□□□ -2.17
RFC3P40938 AC104581.2-201ENST00000572227 430 ntBASIC1.51□□□□□ -2.17
RFC3P40938 MIR5692A1-201ENST00000580523 69 ntBASIC1.51□□□□□ -2.17
RFC3P40938 AC245884.10-201ENST00000597355 337 ntBASIC1.51□□□□□ -2.17
RFC3P40938 AC078795.2-201ENST00000602835 1252 ntBASIC1.51□□□□□ -2.17
RFC3P40938 AC103810.8-201ENST00000607347 118 ntBASIC1.51□□□□□ -2.17
RFC3P40938 RMST_4.1-201ENST00000616886 107 ntBASIC1.51□□□□□ -2.17
RFC3P40938 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.51□□□□□ -2.17
RFC3P40938 AC026585.1-201ENST00000619582 524 ntBASIC1.51□□□□□ -2.17
RFC3P40938 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RFC3P40938 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.5□□□□□ -2.17
RFC3P40938 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.5□□□□□ -2.17
RFC3P40938 SNORD48-201ENST00000364953 64 ntBASIC1.5□□□□□ -2.17
RFC3P40938 RNA5SP501-201ENST00000410990 112 ntBASIC1.5□□□□□ -2.17
RFC3P40938 RPL23AP36-201ENST00000413895 458 ntBASIC1.5□□□□□ -2.17
RFC3P40938 RPL21P90-201ENST00000415692 466 ntBASIC1.5□□□□□ -2.17
RFC3P40938 BTF3P4-201ENST00000418852 495 ntBASIC1.5□□□□□ -2.17
RFC3P40938 CBX3P6-201ENST00000430257 527 ntBASIC1.5□□□□□ -2.17
RFC3P40938 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.5□□□□□ -2.17
RFC3P40938 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.5□□□□□ -2.17
RFC3P40938 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
RFC3P40938 AC087884.1-201ENST00000469738 328 ntBASIC1.5□□□□□ -2.17
RFC3P40938 RPL30P12-201ENST00000474666 353 ntBASIC1.5□□□□□ -2.17
RFC3P40938 MTCYBP40-201ENST00000509390 1135 ntBASIC1.5□□□□□ -2.17
RFC3P40938 AC096745.1-201ENST00000509945 370 ntBASIC1.5□□□□□ -2.17
RFC3P40938 AC108729.3-201ENST00000513484 108 ntBASIC1.5□□□□□ -2.17
RFC3P40938 RNU6-965P-201ENST00000516721 96 ntBASIC1.5□□□□□ -2.17
RFC3P40938 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.5□□□□□ -2.17
RFC3P40938 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.5□□□□□ -2.17
RFC3P40938 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.5□□□□□ -2.17
RFC3P40938 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.5□□□□□ -2.17
RFC3P40938 HMGN1P30-201ENST00000589286 268 ntBASIC1.5□□□□□ -2.17
RFC3P40938 AL136363.2-201ENST00000604173 851 ntBASIC1.5□□□□□ -2.17
RFC3P40938 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.5□□□□□ -2.17
RFC3P40938 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.5□□□□□ -2.17
RFC3P40938 AC027807.2-201ENST00000616099 408 ntBASIC1.5□□□□□ -2.17
RFC3P40938 AC099654.13-201ENST00000639774 207 ntBASIC1.5□□□□□ -2.17
RFC3P40938 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.5□□□□□ -2.17
RFC3P40938 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RFC3P40938 snoU2_19.1-201ENST00000362361 80 ntBASIC1.49□□□□□ -2.17
RFC3P40938 RNU6-78P-201ENST00000362897 107 ntBASIC1.49□□□□□ -2.17
RFC3P40938 RNU6-1214P-201ENST00000363650 109 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms