Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MTCYBP15-201ENST00000433123 1127 ntBASIC0.08□□□□□ -2.4
SNCAP37840 AC099677.2-201ENST00000436385 175 ntBASIC0.08□□□□□ -2.4
SNCAP37840 AL008629.1-201ENST00000438615 184 ntBASIC0.08□□□□□ -2.4
SNCAP37840 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.08□□□□□ -2.4
SNCAP37840 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.08□□□□□ -2.4
SNCAP37840 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.08□□□□□ -2.4
SNCAP37840 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.08□□□□□ -2.4
SNCAP37840 AC090330.1-201ENST00000588646 764 ntBASIC0.08□□□□□ -2.4
SNCAP37840 AC010615.1-201ENST00000594254 1764 ntBASIC0.07□□□□□ -2.4
SNCAP37840 AC027514.1-201ENST00000588561 1603 ntBASIC0.07□□□□□ -2.4
SNCAP37840 AL589743.1-201ENST00000551932 2712 ntBASIC0.07□□□□□ -2.4
SNCAP37840 RNU6-969P-201ENST00000383900 105 ntBASIC0.07□□□□□ -2.4
SNCAP37840 RNU6-754P-201ENST00000391166 107 ntBASIC0.07□□□□□ -2.4
SNCAP37840 CBX3P9-201ENST00000402326 552 ntBASIC0.07□□□□□ -2.4
SNCAP37840 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.07□□□□□ -2.4
SNCAP37840 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.07□□□□□ -2.4
SNCAP37840 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.07□□□□□ -2.4
SNCAP37840 AC020550.1-201ENST00000447385 163 ntBASIC0.07□□□□□ -2.4
SNCAP37840 SNORD60.2-201ENST00000516883 86 ntBASIC0.07□□□□□ -2.4
SNCAP37840 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.07□□□□□ -2.4
SNCAP37840 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.07□□□□□ -2.4
SNCAP37840 AC104417.1-201ENST00000523974 751 ntBASIC0.07□□□□□ -2.4
SNCAP37840 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.07□□□□□ -2.4
SNCAP37840 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.07□□□□□ -2.4
SNCAP37840 AC023824.3-201ENST00000569003 562 ntBASIC0.07□□□□□ -2.4
SNCAP37840 AC090615.1-201ENST00000577519 154 ntBASIC0.07□□□□□ -2.4
SNCAP37840 HMGN1P30-201ENST00000589286 268 ntBASIC0.07□□□□□ -2.4
SNCAP37840 AC069114.2-201ENST00000604699 304 ntBASIC0.07□□□□□ -2.4
SNCAP37840 AC091946.2-201ENST00000606105 291 ntBASIC0.07□□□□□ -2.4
SNCAP37840 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.07□□□□□ -2.4
SNCAP37840 AC093788.1-201ENST00000609356 927 ntBASIC0.07□□□□□ -2.4
SNCAP37840 AC009032.1-201ENST00000617574 431 ntBASIC0.07□□□□□ -2.4
SNCAP37840 MIR6734-201ENST00000621166 68 ntBASIC0.07□□□□□ -2.4
SNCAP37840 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.06□□□□□ -2.4
SNCAP37840 RNU6-655P-201ENST00000362858 107 ntBASIC0.06□□□□□ -2.4
SNCAP37840 RNU6-1176P-201ENST00000390955 107 ntBASIC0.06□□□□□ -2.4
SNCAP37840 MTCO1P56-201ENST00000401674 224 ntBASIC0.06□□□□□ -2.4
SNCAP37840 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.06□□□□□ -2.4
SNCAP37840 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.06□□□□□ -2.4
SNCAP37840 USP9YP22-201ENST00000438971 294 ntBASIC0.06□□□□□ -2.4
SNCAP37840 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.06□□□□□ -2.4
SNCAP37840 ATP5J2P3-201ENST00000451550 258 ntBASIC0.06□□□□□ -2.4
SNCAP37840 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.06□□□□□ -2.4
SNCAP37840 AC026410.2-201ENST00000460281 156 ntBASIC0.06□□□□□ -2.4
SNCAP37840 AC013828.1-201ENST00000481845 158 ntBASIC0.06□□□□□ -2.4
SNCAP37840 AC113410.1-201ENST00000505029 247 ntBASIC0.06□□□□□ -2.4
SNCAP37840 SNORA68.3-201ENST00000515906 83 ntBASIC0.06□□□□□ -2.4
SNCAP37840 RNA5SP490-201ENST00000517141 136 ntBASIC0.06□□□□□ -2.4
SNCAP37840 AC023050.2-201ENST00000544968 387 ntBASIC0.06□□□□□ -2.4
SNCAP37840 AC137800.2-201ENST00000574375 120 ntBASIC0.06□□□□□ -2.4
SNCAP37840 MIR3124-201ENST00000582636 67 ntBASIC0.06□□□□□ -2.4
SNCAP37840 AL590229.1-201ENST00000603497 542 ntBASIC0.06□□□□□ -2.4
SNCAP37840 AC092106.3-201ENST00000611308 722 ntBASIC0.06□□□□□ -2.4
SNCAP37840 MIRLET7D-201ENST00000362263 87 ntBASIC0.05□□□□□ -2.4
SNCAP37840 U3.9-201ENST00000363823 204 ntBASIC0.05□□□□□ -2.4
SNCAP37840 RNU6-1078P-201ENST00000364522 103 ntBASIC0.05□□□□□ -2.4
SNCAP37840 RNU6-1327P-201ENST00000365302 105 ntBASIC0.05□□□□□ -2.4
SNCAP37840 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.05□□□□□ -2.4
SNCAP37840 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.05□□□□□ -2.4
SNCAP37840 AC138623.1-201ENST00000418060 216 ntBASIC0.05□□□□□ -2.4
SNCAP37840 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.05□□□□□ -2.4
SNCAP37840 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.05□□□□□ -2.4
SNCAP37840 AC105313.1-201ENST00000509121 353 ntBASIC0.05□□□□□ -2.4
SNCAP37840 AC010587.2-201ENST00000511727 448 ntBASIC0.05□□□□□ -2.4
SNCAP37840 AP003355.1-201ENST00000518956 587 ntBASIC0.05□□□□□ -2.4
SNCAP37840 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.05□□□□□ -2.4
SNCAP37840 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.05□□□□□ -2.4
SNCAP37840 MIR924-201ENST00000638017 53 ntBASIC0.05□□□□□ -2.4
SNCAP37840 RNU6-1210P-201ENST00000363775 107 ntBASIC0.04□□□□□ -2.4
SNCAP37840 Y_RNA.332-201ENST00000365271 113 ntBASIC0.04□□□□□ -2.4
SNCAP37840 Y_RNA.363-201ENST00000365529 113 ntBASIC0.04□□□□□ -2.4
SNCAP37840 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.04□□□□□ -2.4
SNCAP37840 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.04□□□□□ -2.4
SNCAP37840 ZNF965P-201ENST00000432501 817 ntBASIC0.04□□□□□ -2.4
SNCAP37840 GTF2IP3-201ENST00000433887 494 ntBASIC0.04□□□□□ -2.4
SNCAP37840 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.04□□□□□ -2.4
SNCAP37840 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.04□□□□□ -2.4
SNCAP37840 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.04□□□□□ -2.4
SNCAP37840 SNRPGP9-201ENST00000456025 225 ntBASIC0.04□□□□□ -2.4
SNCAP37840 HMGB1P30-201ENST00000492455 606 ntBASIC0.04□□□□□ -2.4
SNCAP37840 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.04□□□□□ -2.4
SNCAP37840 AC079140.3-201ENST00000511111 550 ntBASIC0.04□□□□□ -2.4
SNCAP37840 AC110760.3-202ENST00000515177 371 ntBASIC0.04□□□□□ -2.4
SNCAP37840 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.04□□□□□ -2.4
SNCAP37840 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
SNCAP37840 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.04□□□□□ -2.4
SNCAP37840 KC877982.1-201ENST00000602313 470 ntBASIC0.04□□□□□ -2.4
SNCAP37840 AP000654.2-201ENST00000605633 586 ntBASIC0.04□□□□□ -2.4
SNCAP37840 TUG1_2.1-201ENST00000614234 87 ntBASIC0.04□□□□□ -2.4
SNCAP37840 U6.99-201ENST00000637524 83 ntBASIC0.04□□□□□ -2.4
SNCAP37840 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
SNCAP37840 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.4
SNCAP37840 RNU6-37P-201ENST00000362692 107 ntBASIC0.03□□□□□ -2.4
SNCAP37840 RNU6-11P-201ENST00000364234 107 ntBASIC0.03□□□□□ -2.4
SNCAP37840 RNU6-898P-201ENST00000365627 104 ntBASIC0.03□□□□□ -2.4
SNCAP37840 RNU6-1-201ENST00000383898 107 ntBASIC0.03□□□□□ -2.4
SNCAP37840 RNU6-42P-201ENST00000384165 107 ntBASIC0.03□□□□□ -2.4
SNCAP37840 RNU6-36P-201ENST00000384172 107 ntBASIC0.03□□□□□ -2.4
SNCAP37840 RNU6-4P-201ENST00000384205 107 ntBASIC0.03□□□□□ -2.4
SNCAP37840 RNU6-5P-201ENST00000384238 107 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms