Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SNORA75B-201ENST00000384053 137 ntBASIC0.42□□□□□ -2.34
CKS2P33552 RNU6-701P-201ENST00000384059 107 ntBASIC0.42□□□□□ -2.34
CKS2P33552 AL079342.2-201ENST00000403367 482 ntBASIC0.42□□□□□ -2.34
CKS2P33552 RNU6-733P-201ENST00000410759 104 ntBASIC0.42□□□□□ -2.34
CKS2P33552 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.42□□□□□ -2.34
CKS2P33552 CYCSP33-201ENST00000414485 327 ntBASIC0.42□□□□□ -2.34
CKS2P33552 TXNL1P1-201ENST00000429528 554 ntBASIC0.42□□□□□ -2.34
CKS2P33552 AL591043.1-201ENST00000432461 424 ntBASIC0.42□□□□□ -2.34
CKS2P33552 AL591704.1-201ENST00000432574 275 ntBASIC0.42□□□□□ -2.34
CKS2P33552 AL591806.2-201ENST00000433122 173 ntBASIC0.42□□□□□ -2.34
CKS2P33552 GTF2IP13-201ENST00000438487 386 ntBASIC0.42□□□□□ -2.34
CKS2P33552 MTCO3P43-201ENST00000440974 771 ntBASIC0.42□□□□□ -2.34
CKS2P33552 AC003071.1-201ENST00000451219 789 ntBASIC0.42□□□□□ -2.34
CKS2P33552 RAP1BP2-201ENST00000478270 544 ntBASIC0.42□□□□□ -2.34
CKS2P33552 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
CKS2P33552 RNA5SP168-201ENST00000516642 112 ntBASIC0.42□□□□□ -2.34
CKS2P33552 RNU6-113P-201ENST00000516653 101 ntBASIC0.42□□□□□ -2.34
CKS2P33552 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.42□□□□□ -2.34
CKS2P33552 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.42□□□□□ -2.34
CKS2P33552 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
CKS2P33552 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.42□□□□□ -2.34
CKS2P33552 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.42□□□□□ -2.34
CKS2P33552 AC107304.1-201ENST00000604229 296 ntBASIC0.42□□□□□ -2.34
CKS2P33552 AL445435.1-201ENST00000604232 665 ntBASIC0.42□□□□□ -2.34
CKS2P33552 AC007363.1-201ENST00000604736 620 ntBASIC0.42□□□□□ -2.34
CKS2P33552 SNORA4.3-201ENST00000365564 137 ntBASIC0.41□□□□□ -2.34
CKS2P33552 RNA5SP390-201ENST00000410191 113 ntBASIC0.41□□□□□ -2.34
CKS2P33552 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.41□□□□□ -2.34
CKS2P33552 AL158053.1-201ENST00000441503 453 ntBASIC0.41□□□□□ -2.34
CKS2P33552 NEFMP1-201ENST00000443423 1006 ntBASIC0.41□□□□□ -2.34
CKS2P33552 AC010095.1-201ENST00000443543 144 ntBASIC0.41□□□□□ -2.34
CKS2P33552 FTH1P25-201ENST00000447665 469 ntBASIC0.41□□□□□ -2.34
CKS2P33552 AC024589.1-201ENST00000512207 263 ntBASIC0.41□□□□□ -2.34
CKS2P33552 RNU6-150P-201ENST00000516237 95 ntBASIC0.41□□□□□ -2.34
CKS2P33552 RN7SKP49-201ENST00000516675 260 ntBASIC0.41□□□□□ -2.34
CKS2P33552 SUMO2P18-201ENST00000518873 252 ntBASIC0.41□□□□□ -2.34
CKS2P33552 MTND1P36-201ENST00000522384 936 ntBASIC0.41□□□□□ -2.34
CKS2P33552 MTCO3P15-201ENST00000526563 574 ntBASIC0.41□□□□□ -2.34
CKS2P33552 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
CKS2P33552 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.41□□□□□ -2.34
CKS2P33552 AC104072.1-201ENST00000568817 668 ntBASIC0.41□□□□□ -2.34
CKS2P33552 AC022432.1-201ENST00000595739 310 ntBASIC0.41□□□□□ -2.34
CKS2P33552 BNIP3P19-201ENST00000605397 577 ntBASIC0.41□□□□□ -2.34
CKS2P33552 AL451064.1-201ENST00000607718 471 ntBASIC0.41□□□□□ -2.34
CKS2P33552 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.41□□□□□ -2.34
CKS2P33552 AC231657.1-201ENST00000624313 397 ntBASIC0.41□□□□□ -2.34
CKS2P33552 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.41□□□□□ -2.34
CKS2P33552 AC245060.5-201ENST00000610778 3293 ntBASIC0.4□□□□□ -2.35
CKS2P33552 RNU6-53P-201ENST00000365367 106 ntBASIC0.4□□□□□ -2.35
CKS2P33552 SNORA18.2-201ENST00000383865 132 ntBASIC0.4□□□□□ -2.35
CKS2P33552 RNU6-1080P-201ENST00000383982 107 ntBASIC0.4□□□□□ -2.35
CKS2P33552 RNU6-1176P-201ENST00000390955 107 ntBASIC0.4□□□□□ -2.35
CKS2P33552 AL117342.1-201ENST00000404861 406 ntBASIC0.4□□□□□ -2.35
CKS2P33552 RAP1BP3-201ENST00000407180 549 ntBASIC0.4□□□□□ -2.35
CKS2P33552 FCF1P10-201ENST00000407590 479 ntBASIC0.4□□□□□ -2.35
CKS2P33552 UBE2V1P15-201ENST00000407776 448 ntBASIC0.4□□□□□ -2.35
CKS2P33552 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.4□□□□□ -2.35
CKS2P33552 AC083875.1-201ENST00000419509 405 ntBASIC0.4□□□□□ -2.35
CKS2P33552 AC123900.1-201ENST00000420390 96 ntBASIC0.4□□□□□ -2.35
CKS2P33552 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.4□□□□□ -2.35
CKS2P33552 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.4□□□□□ -2.35
CKS2P33552 LARP1BP3-201ENST00000437229 869 ntBASIC0.4□□□□□ -2.35
CKS2P33552 AL157398.1-201ENST00000452981 186 ntBASIC0.4□□□□□ -2.35
CKS2P33552 RPS27P22-201ENST00000478056 241 ntBASIC0.4□□□□□ -2.35
CKS2P33552 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.4□□□□□ -2.35
CKS2P33552 TRBVA-201ENST00000498804 316 ntBASIC0.4□□□□□ -2.35
CKS2P33552 AC079140.3-201ENST00000511111 550 ntBASIC0.4□□□□□ -2.35
CKS2P33552 MIR449C-201ENST00000516047 92 ntBASIC0.4□□□□□ -2.35
CKS2P33552 RNY4P37-201ENST00000516225 96 ntBASIC0.4□□□□□ -2.35
CKS2P33552 SNORD60.2-201ENST00000516883 86 ntBASIC0.4□□□□□ -2.35
CKS2P33552 AC090142.3-201ENST00000519012 385 ntBASIC0.4□□□□□ -2.35
CKS2P33552 AP003484.1-201ENST00000530974 250 ntBASIC0.4□□□□□ -2.35
CKS2P33552 AL157871.3-201ENST00000557231 293 ntBASIC0.4□□□□□ -2.35
CKS2P33552 VN1R80P-201ENST00000597126 338 ntBASIC0.4□□□□□ -2.35
CKS2P33552 AL365204.3-201ENST00000612448 685 ntBASIC0.4□□□□□ -2.35
CKS2P33552 MTND4P16-201ENST00000466108 1367 ntBASIC0.4□□□□□ -2.35
CKS2P33552 Y_RNA.124-201ENST00000363339 93 ntBASIC0.39□□□□□ -2.35
CKS2P33552 SNORD18A-201ENST00000363753 72 ntBASIC0.39□□□□□ -2.35
CKS2P33552 RNU6-72P-201ENST00000384285 79 ntBASIC0.39□□□□□ -2.35
CKS2P33552 MIR508-201ENST00000384857 115 ntBASIC0.39□□□□□ -2.35
CKS2P33552 RNU6-482P-201ENST00000391068 107 ntBASIC0.39□□□□□ -2.35
CKS2P33552 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.39□□□□□ -2.35
CKS2P33552 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.39□□□□□ -2.35
CKS2P33552 AL365338.1-201ENST00000422282 858 ntBASIC0.39□□□□□ -2.35
CKS2P33552 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.39□□□□□ -2.35
CKS2P33552 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.39□□□□□ -2.35
CKS2P33552 AL583843.1-201ENST00000456070 346 ntBASIC0.39□□□□□ -2.35
CKS2P33552 snoU13.27-201ENST00000459278 104 ntBASIC0.39□□□□□ -2.35
CKS2P33552 BET1P1-201ENST00000482276 359 ntBASIC0.39□□□□□ -2.35
CKS2P33552 COX6CP6-201ENST00000490840 228 ntBASIC0.39□□□□□ -2.35
CKS2P33552 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.39□□□□□ -2.35
CKS2P33552 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CKS2P33552 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.39□□□□□ -2.35
CKS2P33552 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.39□□□□□ -2.35
CKS2P33552 AC021451.1-201ENST00000523498 1129 ntBASIC0.39□□□□□ -2.35
CKS2P33552 AC104417.1-201ENST00000523974 751 ntBASIC0.39□□□□□ -2.35
CKS2P33552 DEFB131D-201ENST00000526803 184 ntBASIC0.39□□□□□ -2.35
CKS2P33552 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.39□□□□□ -2.35
CKS2P33552 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.39□□□□□ -2.35
CKS2P33552 MIR5708-201ENST00000579723 85 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms