Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC6A4P31645 RNU6-928P-201ENST00000516876 104 ntBASIC3.36□□□□□ -1.87
SLC6A4P31645 RNU7-4P-201ENST00000516961 62 ntBASIC3.36□□□□□ -1.87
SLC6A4P31645 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC6A4P31645 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.36□□□□□ -1.87
SLC6A4P31645 AC010653.1-201ENST00000571108 881 ntBASIC3.36□□□□□ -1.87
SLC6A4P31645 MIR5696-201ENST00000578474 85 ntBASIC3.36□□□□□ -1.87
SLC6A4P31645 AP001836.1-201ENST00000604675 523 ntBASIC3.36□□□□□ -1.87
SLC6A4P31645 AC007485.1-201ENST00000616755 206 ntBASIC3.36□□□□□ -1.87
SLC6A4P31645 AC008121.3-201ENST00000618726 433 ntBASIC3.36□□□□□ -1.87
SLC6A4P31645 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC6A4P31645 CDC27P3-201ENST00000635418 1910 ntBASIC3.36□□□□□ -1.87
SLC6A4P31645 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC6A4P31645 MTND5P16-201ENST00000460269 1703 ntBASIC3.36□□□□□ -1.87
SLC6A4P31645 MTND5P9-201ENST00000503854 1755 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC6A4P31645 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC6A4P31645 RNU6-105P-201ENST00000363909 104 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 Y_RNA.500-201ENST00000384466 111 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 MIR128-1-201ENST00000384921 82 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 AL138885.1-201ENST00000405921 675 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 RNU6-985P-201ENST00000410182 104 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 RNU6-1245P-201ENST00000411130 106 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A4P31645 NUP35P1-201ENST00000422734 947 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 MTCYBP10-201ENST00000424905 650 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 MTND3P2-201ENST00000438452 342 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 AC125238.1-201ENST00000448842 249 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC6A4P31645 GSTA11P-201ENST00000452866 669 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 RPL23AP49-201ENST00000492925 468 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC6A4P31645 Y_RNA.721-201ENST00000517207 102 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 CBX3P8-201ENST00000532412 525 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 MIR5047-201ENST00000579212 100 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 MIR2682-201ENST00000580305 110 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 MIR4680-201ENST00000580906 66 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 AC012493.2-201ENST00000595083 291 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 AC005014.2-201ENST00000607795 599 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 AC138627.2-201ENST00000624202 601 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 AC110491.1-201ENST00000562191 2010 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 AL353746.1-201ENST00000566293 6881 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC6A4P31645 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
SLC6A4P31645 MTND4P1-201ENST00000457501 1466 ntBASIC3.35□□□□□ -1.87
SLC6A4P31645 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC6A4P31645 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC6A4P31645 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC6A4P31645 AC005592.1-201ENST00000566527 1640 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC6A4P31645 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SLC6A4P31645 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC6A4P31645 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 RNU6-527P-201ENST00000363425 104 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 RNU6-270P-201ENST00000364131 105 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 Y_RNA.496-201ENST00000384444 101 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 U3.26-201ENST00000391236 204 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 AP000275.1-201ENST00000411943 390 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC6A4P31645 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC6A4P31645 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC6A4P31645 AL591043.1-201ENST00000432461 424 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC6A4P31645 SSXP4-201ENST00000451349 245 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 AL049873.1-201ENST00000480540 376 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC6A4P31645 SNORA31.18-201ENST00000517043 134 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 NDUFB9P3-201ENST00000521269 501 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC6A4P31645 AL391261.3-201ENST00000557194 520 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC6A4P31645 AC092447.9-201ENST00000603395 144 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 HSPE1P7-201ENST00000604681 321 ntBASIC3.34□□□□□ -1.87
SLC6A4P31645 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC6A4P31645 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SLC6A4P31645 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.88
SLC6A4P31645 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SLC6A4P31645 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC6A4P31645 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SLC6A4P31645 RNA5SP374-201ENST00000362939 125 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 RNU6-942P-201ENST00000363002 107 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 RNU6-595P-201ENST00000363944 107 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 AP002088.1-201ENST00000382740 395 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 RNU6-784P-201ENST00000384330 106 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 MIR625-201ENST00000385047 85 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 BTF3L4P2-201ENST00000392798 346 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 RNU2-23P-201ENST00000410545 195 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC6A4P31645 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC6A4P31645 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC6A4P31645 HMGN2P10-201ENST00000448085 265 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 FO393415.2-201ENST00000480085 343 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC6A4P31645 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC6A4P31645 MIR5004-201ENST00000579078 107 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC6A4P31645 AL451007.1-201ENST00000595491 289 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 AL356157.2-201ENST00000605122 111 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms