Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.35□□□□□ -1.71
ERCC3P19447 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.35□□□□□ -1.71
ERCC3P19447 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ERCC3P19447 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.35□□□□□ -1.71
ERCC3P19447 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ERCC3P19447 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
ERCC3P19447 MAPK10-373ENST00000641983 6772 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ERCC3P19447 RNA5SP72-201ENST00000364442 117 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 CD24P4-201ENST00000382840 243 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 RNU6-622P-201ENST00000384272 103 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 MIR190B-201ENST00000401119 79 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 AC114482.1-201ENST00000418010 247 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.34□□□□□ -1.71
ERCC3P19447 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.34□□□□□ -1.71
ERCC3P19447 AC004383.1-201ENST00000438135 289 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 AP001324.2-201ENST00000461163 319 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.34□□□□□ -1.71
ERCC3P19447 RPL30P1-201ENST00000488676 339 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.34□□□□□ -1.71
ERCC3P19447 SNORA25.11-201ENST00000515935 105 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 RNU5B-3P-201ENST00000516601 115 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.34□□□□□ -1.71
ERCC3P19447 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.34□□□□□ -1.71
ERCC3P19447 RPL23AP78-201ENST00000599928 470 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 AC124312.5-201ENST00000604451 268 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 U2.1-201ENST00000618978 145 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 AC092628.2-201ENST00000622492 339 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 SNORA50A-202ENST00000629536 136 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 MIR4272-201ENST00000635924 64 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 MTND5P1-201ENST00000445440 1375 ntBASIC4.34□□□□□ -1.71
ERCC3P19447 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.34□□□□□ -1.71
ERCC3P19447 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
ERCC3P19447 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ERCC3P19447 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.72
ERCC3P19447 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
ERCC3P19447 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC3P19447 Y_RNA.358-201ENST00000365491 99 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 SNORD14.1-201ENST00000365609 90 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 SNORA29-201ENST00000384183 140 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 Y_RNA.455-201ENST00000384230 98 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 RNU6-541P-201ENST00000384709 110 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 MIR491-201ENST00000384877 84 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 MIR483-201ENST00000385070 76 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 UBA52P6-201ENST00000399822 382 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 MTCYBP2-201ENST00000407745 171 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 ATP5A1P2-201ENST00000412323 255 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 AL358453.1-201ENST00000422522 250 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 DPH3P2-201ENST00000422618 250 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 RPL21P40-201ENST00000428586 483 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC3P19447 AC087477.1-201ENST00000465747 340 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 MTATP8P1-201ENST00000467115 207 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 AC007458.1-201ENST00000542812 373 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 MIR3200-201ENST00000580767 85 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 RPS15AP11-201ENST00000594193 385 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC3P19447 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.33□□□□□ -1.72
ERCC3P19447 AC104695.3-201ENST00000604052 296 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 AC006077.1-201ENST00000604746 343 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 MIR7975-201ENST00000619350 68 ntBASIC4.33□□□□□ -1.72
ERCC3P19447 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC3P19447 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC3P19447 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC3P19447 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.32□□□□□ -1.72
ERCC3P19447 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.32□□□□□ -1.72
ERCC3P19447 MTND5P16-201ENST00000460269 1703 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC3P19447 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
ERCC3P19447 SNORD114-19-201ENST00000363072 75 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 RNU6-1309P-201ENST00000363305 108 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 RNU6-487P-201ENST00000365430 104 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 SNORA36A-201ENST00000384221 132 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 RNVU1-14-201ENST00000384770 164 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 MIR218-2-201ENST00000385006 110 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ERCC3P19447 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC3P19447 AL590135.1-201ENST00000422215 156 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 AC019205.3-201ENST00000424573 156 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 AC009414.1-201ENST00000427200 443 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.32□□□□□ -1.72
ERCC3P19447 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.32□□□□□ -1.72
ERCC3P19447 AC016700.2-201ENST00000446011 156 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 CHEK2P4-201ENST00000450340 246 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC3P19447 MTCO3P8-201ENST00000453691 755 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 AC112771.1-201ENST00000463581 102 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 AC093663.1-201ENST00000497190 394 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC3P19447 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 Y_RNA.721-201ENST00000517207 102 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 AC091144.1-201ENST00000519573 138 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 IGHV3-76-201ENST00000522465 295 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC3P19447 AC087588.2-201ENST00000617667 426 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 UCA1.1-201ENST00000620952 75 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC3P19447 AC073346.2-201ENST00000624724 2058 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC3P19447 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms