Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SRIP3-201ENST00000413200 219 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 MED13P1-201ENST00000428342 171 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.23□□□□□ -2.21
CTLA4P16410 RPS24P1-201ENST00000438550 371 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.23□□□□□ -2.21
CTLA4P16410 FDX1P2-201ENST00000450769 375 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 PRELID3BP1-201ENST00000457142 540 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 RNA5SP57-201ENST00000459463 123 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.23□□□□□ -2.21
CTLA4P16410 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.23□□□□□ -2.21
CTLA4P16410 AC117522.1-201ENST00000509821 380 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 FAM206BP-201ENST00000510179 541 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AF131216.2-201ENST00000512316 564 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.23□□□□□ -2.21
CTLA4P16410 ELOCP32-201ENST00000548625 324 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 BNIP3P6-201ENST00000549284 499 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.23□□□□□ -2.21
CTLA4P16410 AC002400.1-201ENST00000569310 726 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 MIR4303-201ENST00000581299 66 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AC103987.3-201ENST00000582071 292 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.23□□□□□ -2.21
CTLA4P16410 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.23□□□□□ -2.21
CTLA4P16410 AC016597.2-201ENST00000613256 341 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AL159153.1-201ENST00000619688 317 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AC009878.1-201ENST00000621819 340 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AC007792.1-201ENST00000623023 402 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AC090517.3-201ENST00000625170 141 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 AC007671.2-201ENST00000637344 619 ntBASIC1.23□□□□□ -2.21
CTLA4P16410 RNU6-371P-201ENST00000364283 108 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 SNORD14D-201ENST00000384390 87 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 SNORA24.1-201ENST00000384401 135 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 MIR30A-201ENST00000385092 71 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 RNA5SP213-201ENST00000391031 106 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 RNU11-3P-201ENST00000391111 133 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 MTCYBP36-201ENST00000404146 440 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 RNA5SP501-201ENST00000410990 112 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 MTCYBP5-201ENST00000423752 1135 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 AC007283.2-201ENST00000424739 197 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 AL589872.1-201ENST00000426602 288 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.22□□□□□ -2.21
CTLA4P16410 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.22□□□□□ -2.21
CTLA4P16410 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.22□□□□□ -2.21
CTLA4P16410 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.22□□□□□ -2.21
CTLA4P16410 PTP4A1P4-201ENST00000512479 322 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.22□□□□□ -2.21
CTLA4P16410 MTND2P32-201ENST00000521584 1038 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.22□□□□□ -2.21
CTLA4P16410 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.22□□□□□ -2.21
CTLA4P16410 AC009977.1-201ENST00000586015 570 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 AC245884.10-201ENST00000597355 337 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 AL670379.2-201ENST00000604983 252 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 AL670379.4-201ENST00000605279 254 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 Z82243.1-201ENST00000609432 473 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 RMST_7.1-201ENST00000621935 268 ntBASIC1.22□□□□□ -2.21
CTLA4P16410 ZNF680P1-201ENST00000436625 1469 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 MIR424-201ENST00000362227 98 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 RNU6-457P-201ENST00000363999 107 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 RNU6-944P-201ENST00000364023 107 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CTLA4P16410 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.21□□□□□ -2.22
CTLA4P16410 RPS3AP36-201ENST00000398190 775 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 RAP1BP3-201ENST00000407180 549 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 RNU6-955P-201ENST00000410497 104 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.21□□□□□ -2.22
CTLA4P16410 EEF1A1P40-201ENST00000412883 573 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 BTF3L4P1-201ENST00000413813 468 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.21□□□□□ -2.22
CTLA4P16410 AL360271.2-201ENST00000447710 161 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 AC112492.4-201ENST00000456549 352 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 snoU13.23-201ENST00000458863 104 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 AC021146.2-201ENST00000504736 556 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.21□□□□□ -2.22
CTLA4P16410 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
CTLA4P16410 MRPS36P3-201ENST00000519284 130 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.21□□□□□ -2.22
CTLA4P16410 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.21□□□□□ -2.22
CTLA4P16410 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.21□□□□□ -2.22
CTLA4P16410 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.21□□□□□ -2.22
CTLA4P16410 AC008521.1-201ENST00000587471 187 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 AC010900.2-201ENST00000604508 210 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 AL451064.1-201ENST00000607718 471 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 RMST_6.1-201ENST00000611980 203 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 MIR7844-201ENST00000616161 122 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 AL157786.1-207ENST00000627771 695 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.21□□□□□ -2.22
CTLA4P16410 ZNF72P-201ENST00000425869 1908 ntBASIC1.21□□□□□ -2.22
CTLA4P16410 RNU1-62P-201ENST00000362599 164 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 RNU6-212P-201ENST00000362642 104 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 RNU6-1214P-201ENST00000363650 109 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 RNU6-1164P-201ENST00000364428 107 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 RNU6-61P-201ENST00000365528 109 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 MIR597-201ENST00000384968 97 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CTLA4P16410 SNORA17.3-201ENST00000391159 129 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 AC068050.1-201ENST00000394891 380 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 ELOCP4-201ENST00000420090 333 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 HMGB1P31-201ENST00000437242 427 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms