Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AC007098.1-201ENST00000420122 367 ntBASIC1.5□□□□□ -2.17
THRAP10827 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.5□□□□□ -2.17
THRAP10827 USP9YP18-201ENST00000425912 695 ntBASIC1.5□□□□□ -2.17
THRAP10827 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.5□□□□□ -2.17
THRAP10827 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.5□□□□□ -2.17
THRAP10827 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.5□□□□□ -2.17
THRAP10827 MTCYBP39-201ENST00000437562 491 ntBASIC1.5□□□□□ -2.17
THRAP10827 MTND5P2-201ENST00000442927 1142 ntBASIC1.5□□□□□ -2.17
THRAP10827 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.5□□□□□ -2.17
THRAP10827 AMD1P1-201ENST00000457220 922 ntBASIC1.5□□□□□ -2.17
THRAP10827 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
THRAP10827 snoU13.14-201ENST00000459372 104 ntBASIC1.5□□□□□ -2.17
THRAP10827 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.5□□□□□ -2.17
THRAP10827 AC010587.1-201ENST00000505809 469 ntBASIC1.5□□□□□ -2.17
THRAP10827 AC108078.2-201ENST00000510750 236 ntBASIC1.5□□□□□ -2.17
THRAP10827 AP003392.2-201ENST00000527269 208 ntBASIC1.5□□□□□ -2.17
THRAP10827 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.5□□□□□ -2.17
THRAP10827 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.5□□□□□ -2.17
THRAP10827 AL050303.3-201ENST00000613704 284 ntBASIC1.5□□□□□ -2.17
THRAP10827 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
THRAP10827 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
THRAP10827 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
THRAP10827 RNY1P10-201ENST00000363268 113 ntBASIC1.49□□□□□ -2.17
THRAP10827 RNU6-1179P-201ENST00000384667 107 ntBASIC1.49□□□□□ -2.17
THRAP10827 MIR517C-201ENST00000385103 95 ntBASIC1.49□□□□□ -2.17
THRAP10827 RNA5SP212-201ENST00000391223 107 ntBASIC1.49□□□□□ -2.17
THRAP10827 CISD1P1-201ENST00000393907 327 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC068050.1-201ENST00000394891 380 ntBASIC1.49□□□□□ -2.17
THRAP10827 MIR1283-2-201ENST00000408621 87 ntBASIC1.49□□□□□ -2.17
THRAP10827 Y_RNA.608-201ENST00000410647 95 ntBASIC1.49□□□□□ -2.17
THRAP10827 AL513185.2-201ENST00000425543 193 ntBASIC1.49□□□□□ -2.17
THRAP10827 AL365184.2-201ENST00000431139 435 ntBASIC1.49□□□□□ -2.17
THRAP10827 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.49□□□□□ -2.17
THRAP10827 RPS24P1-201ENST00000438550 371 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC092473.1-201ENST00000441098 221 ntBASIC1.49□□□□□ -2.17
THRAP10827 AL590365.1-201ENST00000450788 243 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC027575.1-201ENST00000481064 460 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.49□□□□□ -2.17
THRAP10827 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.49□□□□□ -2.17
THRAP10827 RNU6-123P-201ENST00000516163 102 ntBASIC1.49□□□□□ -2.17
THRAP10827 Y_RNA.687-201ENST00000516558 91 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.49□□□□□ -2.17
THRAP10827 AP003181.2-201ENST00000528941 181 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC087441.2-201ENST00000529141 262 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC022616.8-201ENST00000533569 253 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.49□□□□□ -2.17
THRAP10827 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
THRAP10827 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
THRAP10827 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.49□□□□□ -2.17
THRAP10827 MIR5697-201ENST00000578045 78 ntBASIC1.49□□□□□ -2.17
THRAP10827 BNIP3P25-201ENST00000596023 559 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC105129.3-201ENST00000605455 485 ntBASIC1.49□□□□□ -2.17
THRAP10827 AL031775.1-201ENST00000607014 887 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC012360.2-201ENST00000609349 391 ntBASIC1.49□□□□□ -2.17
THRAP10827 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
THRAP10827 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC007792.1-201ENST00000623023 402 ntBASIC1.49□□□□□ -2.17
THRAP10827 AC007671.2-201ENST00000637344 619 ntBASIC1.49□□□□□ -2.17
THRAP10827 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
THRAP10827 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
THRAP10827 RNU5F-6P-201ENST00000362979 116 ntBASIC1.48□□□□□ -2.17
THRAP10827 MIR29B2-201ENST00000385055 81 ntBASIC1.48□□□□□ -2.17
THRAP10827 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
THRAP10827 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
THRAP10827 RNU6-174P-201ENST00000410406 106 ntBASIC1.48□□□□□ -2.17
THRAP10827 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.48□□□□□ -2.17
THRAP10827 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.48□□□□□ -2.17
THRAP10827 EPS15P1-201ENST00000448836 336 ntBASIC1.48□□□□□ -2.17
THRAP10827 FO393415.2-201ENST00000480085 343 ntBASIC1.48□□□□□ -2.17
THRAP10827 MTND2P14-201ENST00000482139 351 ntBASIC1.48□□□□□ -2.17
THRAP10827 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.48□□□□□ -2.17
THRAP10827 AC005840.1-201ENST00000498412 377 ntBASIC1.48□□□□□ -2.17
THRAP10827 AC117522.1-201ENST00000509821 380 ntBASIC1.48□□□□□ -2.17
THRAP10827 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.48□□□□□ -2.17
THRAP10827 AF131216.2-201ENST00000512316 564 ntBASIC1.48□□□□□ -2.17
THRAP10827 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.48□□□□□ -2.17
THRAP10827 Y_RNA.675-201ENST00000516389 149 ntBASIC1.48□□□□□ -2.17
THRAP10827 SNORA43.2-201ENST00000516652 128 ntBASIC1.48□□□□□ -2.17
THRAP10827 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
THRAP10827 DUXAP5-201ENST00000529668 529 ntBASIC1.48□□□□□ -2.17
THRAP10827 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.48□□□□□ -2.17
THRAP10827 AC018630.3-201ENST00000542637 96 ntBASIC1.48□□□□□ -2.17
THRAP10827 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.48□□□□□ -2.17
THRAP10827 AC015720.1-201ENST00000565251 277 ntBASIC1.48□□□□□ -2.17
THRAP10827 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.48□□□□□ -2.17
THRAP10827 CLIC4P2-201ENST00000601934 717 ntBASIC1.48□□□□□ -2.17
THRAP10827 DEFB131E-202ENST00000602581 683 ntBASIC1.48□□□□□ -2.17
THRAP10827 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.48□□□□□ -2.17
THRAP10827 AC027449.1-201ENST00000608890 407 ntBASIC1.48□□□□□ -2.17
THRAP10827 Z82243.1-201ENST00000609432 473 ntBASIC1.48□□□□□ -2.17
THRAP10827 AC138749.5-201ENST00000611461 208 ntBASIC1.48□□□□□ -2.17
THRAP10827 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.48□□□□□ -2.17
THRAP10827 AC116165.2-201ENST00000616705 206 ntBASIC1.48□□□□□ -2.17
THRAP10827 AL132822.1-201ENST00000617063 513 ntBASIC1.48□□□□□ -2.17
THRAP10827 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.48□□□□□ -2.17
THRAP10827 AC099654.13-201ENST00000639774 207 ntBASIC1.48□□□□□ -2.17
THRAP10827 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
THRAP10827 RNU6-212P-201ENST00000362642 104 ntBASIC1.47□□□□□ -2.17
THRAP10827 SNORD115-3-201ENST00000363100 82 ntBASIC1.47□□□□□ -2.17
THRAP10827 RNU6-39P-201ENST00000384344 107 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms