Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 Y_RNA.240-201ENST00000364469 95 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 Z92545.1-201ENST00000411782 234 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 HMGN2P30-201ENST00000423237 256 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 SNRPGP5-201ENST00000456003 220 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 AC104581.2-201ENST00000572227 430 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 MIR4659A-201ENST00000580269 81 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 AL591424.2-201ENST00000617023 128 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 AC097372.5-201ENST00000623665 376 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 U2.21-201ENST00000637295 81 ntBASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.1□□□□□ -1.59
CSB-PGBD3P0DP91 AC008725.1-201ENST00000605123 2263 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 RNU4-90P-201ENST00000362773 141 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-78P-201ENST00000362897 107 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 Y_RNA.233-201ENST00000364407 101 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-918P-201ENST00000391219 106 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 RNA5SP31-201ENST00000411144 127 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 RPS6P12-201ENST00000432491 726 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 AC083863.1-201ENST00000438811 231 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 MTATP6P7-201ENST00000453315 681 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 RPS26P28-201ENST00000470806 348 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 RNA5SP164-201ENST00000516533 110 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-612P-201ENST00000516909 102 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 AC090281.1-201ENST00000523019 276 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 AC005476.1-201ENST00000554427 397 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 U4.7-201ENST00000638126 106 ntBASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CSB-PGBD3P0DP91 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CSB-PGBD3P0DP91 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.6
CSB-PGBD3P0DP91 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-778P-201ENST00000363269 103 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 Y_RNA.286-201ENST00000364813 102 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-22P-201ENST00000384355 107 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 Y_RNA.504-201ENST00000384481 104 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 AL033519.2-201ENST00000403958 392 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 RPL19P1-201ENST00000411635 428 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 RPL26P27-201ENST00000414397 437 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 RPL37P4-201ENST00000448908 268 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 RPS29P27-201ENST00000463711 170 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 SNORA31.18-201ENST00000517043 134 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 LINC00933-203ENST00000559812 219 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 AL162424.1-201ENST00000602325 221 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 AC005046.1-201ENST00000608515 625 ntBASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CSB-PGBD3P0DP91 MFSD8-236ENST00000641509 4050 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 Z98749.2-208ENST00000381646 500 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 RNU1-73P-201ENST00000383971 164 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 U3.37-201ENST00000408528 213 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-1135P-201ENST00000411083 103 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 ATP5A1P2-201ENST00000412323 255 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 HMGB1P37-201ENST00000439613 609 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 HMGB3P8-201ENST00000449709 577 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 HMGN2P16-201ENST00000456802 261 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 AC087477.1-201ENST00000465747 340 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 AC022795.1-201ENST00000473808 480 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 ANXA2P1-201ENST00000505539 926 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 AC090617.7-201ENST00000623952 126 ntBASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.07□□□□□ -1.6
CSB-PGBD3P0DP91 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms