Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC104984.5-201ENST00000586878 94 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AL158827.2-201ENST00000602494 330 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HOXC4P09017 AC009994.1-201ENST00000606889 253 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AC010378.1-201ENST00000619270 362 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AL691447.3-201ENST00000635020 330 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HOXC4P09017 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.07□□□□□ -2.08
HOXC4P09017 ZNF720P1-201ENST00000562403 1939 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HOXC4P09017 NACAP2-201ENST00000318548 624 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 AC073343.1-201ENST00000328239 651 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 MIRLET7G-201ENST00000362280 84 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 Y_RNA.86-201ENST00000363020 111 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 Y_RNA.245-201ENST00000364493 95 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 SNORD115-7-201ENST00000365306 82 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 Y_RNA.576-201ENST00000384781 102 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 RNU6-903P-201ENST00000391270 109 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 RNU6-1148P-201ENST00000410992 104 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC4P09017 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC4P09017 RAC1P6-201ENST00000423911 575 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 BX276092.3-201ENST00000424182 230 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 RPL36AP53-201ENST00000432891 316 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 MTCO3P18-201ENST00000440206 761 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 MTND4P25-201ENST00000441039 533 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 SNRPEP8-201ENST00000442866 260 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.06□□□□□ -2.08
HOXC4P09017 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC4P09017 RNU7-182P-201ENST00000459009 62 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 SNORD97-201ENST00000459187 142 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC4P09017 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 HMGN1P12-201ENST00000499125 195 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 AC008628.2-201ENST00000502605 298 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 MTCO3P9-201ENST00000506989 781 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC4P09017 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC4P09017 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 MIR5002-201ENST00000584713 97 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 BNIP3P9-201ENST00000603714 553 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 AL121917.1-203ENST00000605534 577 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXC4P09017 AC009033.1-201ENST00000624279 431 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 AL008636.1-201ENST00000625038 1018 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC4P09017 MTND4P27-201ENST00000450813 1354 ntBASIC2.06□□□□□ -2.08
HOXC4P09017 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HOXC4P09017 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC4P09017 AC080128.1-201ENST00000474389 1917 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC4P09017 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC4P09017 RNU6-552P-201ENST00000362869 119 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 RNU6-179P-201ENST00000363350 107 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 MIR504-201ENST00000385065 83 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 RNU6-332P-201ENST00000391193 108 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 RPL26P27-201ENST00000414397 437 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXC4P09017 SNRPEP10-201ENST00000420249 274 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 TOMM20P4-201ENST00000427861 435 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXC4P09017 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXC4P09017 USP9YP8-201ENST00000441913 500 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXC4P09017 AC020550.1-201ENST00000447385 163 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 MTND5P20-201ENST00000448677 143 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 MTND3P16-201ENST00000452205 344 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AL139109.1-201ENST00000455491 297 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 RPS27AP10-201ENST00000496103 208 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AC108078.2-201ENST00000510750 236 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AC025465.4-201ENST00000513422 638 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 RNU6-1038P-201ENST00000516516 104 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 Y_RNA.702-201ENST00000516843 96 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 CENPUP1-201ENST00000526649 1202 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AC093012.1-202ENST00000549403 582 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXC4P09017 AL118558.2-201ENST00000556294 238 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AC007151.1-201ENST00000572774 483 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 MIR4703-201ENST00000577728 79 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 MIR4658-201ENST00000584344 65 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AC008521.1-201ENST00000587471 187 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 RPS15AP11-201ENST00000594193 385 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 LARP7P1-201ENST00000605576 316 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 DISC2.1-201ENST00000612827 205 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 HMGB1P24-202ENST00000615653 685 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AC104260.1-201ENST00000616660 539 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AC006504.8-201ENST00000621046 635 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 MTND5P17-201ENST00000418405 1603 ntBASIC2.05□□□□□ -2.08
HOXC4P09017 AC010889.1-201ENST00000566193 2666 ntBASIC2.04□□□□□ -2.08
HOXC4P09017 SNORA38-201ENST00000363946 132 ntBASIC2.04□□□□□ -2.08
HOXC4P09017 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.04□□□□□ -2.08
HOXC4P09017 RNU2-2P-201ENST00000410396 191 ntBASIC2.04□□□□□ -2.08
HOXC4P09017 Y_RNA.615-201ENST00000410769 117 ntBASIC2.04□□□□□ -2.08
HOXC4P09017 RPL21P111-201ENST00000418453 477 ntBASIC2.04□□□□□ -2.08
HOXC4P09017 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXC4P09017 CALM2P2-201ENST00000428512 440 ntBASIC2.04□□□□□ -2.08
HOXC4P09017 MTND1P18-201ENST00000448191 573 ntBASIC2.04□□□□□ -2.08
HOXC4P09017 MTND3P10-201ENST00000450967 341 ntBASIC2.04□□□□□ -2.08
HOXC4P09017 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXC4P09017 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms